Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g3073 ATGACAAAACGCTGTATTAATTTAGAAAGGTTTAAACCCCTCCCCTATCTTGTTCCTTGGCTGGGTCGTTCAAGGCTAAAACCCCTTCTTCTCTTGTTCACTCACTCTCTTTGTTCCATGGCCTTGCAATTCCAGCTTTCAGTTCCTCAATTTCTTTCTCCTGCAACCACACCCAACTCCATAACCGTAAAATCCCAACACTTGCTTCGTTTTCCGAATCCAAATCCTTTTCCAACCCTTCTTCTTCGTTCTCGAGCTCCTGCAGCTATCGGCCCCGACGGCAAATTCTACCCTAACACCGCCGACGATGACCCACCTGAGGTCCCCGAGGACTCCTCCCACGGATTCTCCACCTTCCAGCAAATCCAATCGCAGGCCGCGCGTGCCCGCCAGCTCCAGGAAGAAGACTTCAAGAAGAACCAGTCCACCTTCCTCGCTGCCATCGCCGACGTCGAGGACGCACCCGACAACGCGTCCCCTCTAGACTCCGACGACAACTCCGGCGACGACCTATTTGGAGAAATCGACAAAGCCATCGCTTTGAAGCGCAAGGAGTTCGTGAAGCAAGGGCTTCTTCAACCCAATCCAAGGAAGCAACCTGCCATTGAAGAGCTCGATGAGCTTCAGCCTGAAGAGGTCGTCGATTTGAAGGAAATCGACGAGCTTCAAGGTCTTAGAGTTGTTTCCGCGGACGATTCCGATGAAGGTTTGGGTGATAGTGAATTCGAGCGTGCGAATCGAGGTTCGTCTCTTCAGTCTCAATCTCAATCTCCGTTTGATATAGATTTCGATAGTTATGGGAAGAGTAAGGCTAGGATTGTGGAACCTAAGTTTAGGATGAGTCTTGCTGAGCTTTTGGATGAGAGCAAGGTTGTGCCTGTTTCTGTGTATGGTAATTTGGAGGTTGAGATCACTGGGATTCAGCATGATTCAAGGATTGTAAGTTCTGGTGATTTGTTTGTGTGCTGTGTTGGGAGGAAAACTGATGGGCATTTGTTCTTGACTGAGGCTGATAAGAGAGGAGCTGTTGCTGTTGTGGCCAGTAAAGAGATTGATATTGAGGAAACCTTGGGTTGCAAGGCATTGGTCATTGTGGAAGATACGAATGCTGTTCTTCCTGTCTTGGCCGCTTCGTTTTACCGGTATCCTTCGAAGAATATGGCAGTTATTGGGATAACTGGGACGTATGGGAAGACGACTACCACGTATTTGATAAAAAGCATGTATGAAGCGATGGGGCTGCGGACTGGGATGTTCAATTCGGTAGCTTGTTATGTGCACGGGGATAATCAGTTGGAGTCACCCAGTATGAGCCCTGATGCTGTTTTGGTTCAGAATTTGATGGCTAAGATGCTTCACAATGGGACTGAAGCTTTGGTCATGGAGACTTCTTCTGATGGACTGGCTCAGGGGAAGTGTGATGAGGTTGATTTTGATATTGCGGTTTTCACGAATTTGAGTGAGGAGGCAGATAGAGACGCAAAGGCTAAGTTGTTCTCGAGAATGGTGGACCCTGATCGGCACAGGAAGGTTGTTAACATTGATGATCCGAATGCGCCTTTCTTCGTTTCGCAGGGGAGCCCAAAAGTTCCTGTTGTGACGTTTGCGTTGGAGAATAAGAGTGCAGATGTTCATCCCTTGAAGTTTGAACTATCCTTGTTTGAGACGCAGGTGTTGGTTAATACGCCCACTGGCATACTAGAAATTTCATCAGGTTTACTTGGAAAGCATAATATTTACAACATTCTTGCTGCCGTGGCAGTTGGTATTGCTGTCGGAGCACCCTTAGAGGACATTGTTAGAGGGATTGAAGAAGTTGATGCAGTTCCTGGTAGGTGTGAGTTAATTGATGAGGAACAAGCGTTTGGGGTGATAGTGGACTATGCACATACACCGGATGCCTTGTCTAGATTGCTTGATAGTGTGAGAGAGCTTGGACCTCGCCGGGTTATTACTGTTGTGGGCTGCTGCGGTGAGGACGACAGGGGAAAGAGACCTATCATGACCAAGATAGCAACAGATAAAAGTGAAGTGACCATGCTGACATCTGATAATCCCAAGAGTGAAGACCCATTGGATATTTTGGATGATATGTTGGCTGGGGTAGGATGGTCAATGCAGGACTACTTGAAGTATGGAGAGAATGACTACTACCCACCTCTTCCAAATGGTCATAGGCTTTTTCTCCATGACATTAGGAGGGTAGCGGTGCGAGCTGCAGTTGCAATGGGCGAGGAGGGTGATGTAGTAGTGGTTGCTGGCAAAGGCCATGAAACATATGAAATAGAAGGTGATAAGAAGGAGTTCTTTGATGACCGGGAAGAGTGTCGAGAGGCATTGCAGTACGTGGATGAGCTTCACCAAGCTGGAATAGATACAAGTGAATTTCCATGGAGGTTACCAGAGAGCCACTGA 2415 0.4766 MTKRCINLERFKPLPYLVPWLGRSRLKPLLLLFTHSLCSMALQFQLSVPQFLSPATTPNSITVKSQHLLRFPNPNPFPTLLLRSRAPAAIGPDGKFYPNTADDDPPEVPEDSSHGFSTFQQIQSQAARARQLQEEDFKKNQSTFLAAIADVEDAPDNASPLDSDDNSGDDLFGEIDKAIALKRKEFVKQGLLQPNPRKQPAIEELDELQPEEVVDLKEIDELQGLRVVSADDSDEGLGDSEFERANRGSSLQSQSQSPFDIDFDSYGKSKARIVEPKFRMSLAELLDESKVVPVSVYGNLEVEITGIQHDSRIVSSGDLFVCCVGRKTDGHLFLTEADKRGAVAVVASKEIDIEETLGCKALVIVEDTNAVLPVLAASFYRYPSKNMAVIGITGTYGKTTTTYLIKSMYEAMGLRTGMFNSVACYVHGDNQLESPSMSPDAVLVQNLMAKMLHNGTEALVMETSSDGLAQGKCDEVDFDIAVFTNLSEEADRDAKAKLFSRMVDPDRHRKVVNIDDPNAPFFVSQGSPKVPVVTFALENKSADVHPLKFELSLFETQVLVNTPTGILEISSGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCELIDEEQAFGVIVDYAHTPDALSRLLDSVRELGPRRVITVVGCCGEDDRGKRPIMTKIATDKSEVTMLTSDNPKSEDPLDILDDMLAGVGWSMQDYLKYGENDYYPPLPNGHRLFLHDIRRVAVRAAVAMGEEGDVVVVAGKGHETYEIEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g3073 804 TIGRFAM murE: UDP-N-acetylmuramyl-tripeptide synthetase 302 781 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Aev03g3073 804 MobiDBLite consensus disorder prediction 228 263 - -
Aev03g3073 804 MobiDBLite consensus disorder prediction 98 133 - -
Aev03g3073 804 SUPERFAMILY MurE/MurF N-terminal domain 281 383 IPR035911 -
Aev03g3073 804 MobiDBLite consensus disorder prediction 113 130 - -
Aev03g3073 804 PANTHER UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE MURE HOMOLOG, CHLOROPLASTIC 258 794 - -
Aev03g3073 804 Pfam Mur ligase family, glutamate ligase domain 609 692 IPR004101 GO:0009058|GO:0016881
Aev03g3073 804 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 609 781 IPR036615 GO:0009058|GO:0016881
Aev03g3073 804 Pfam Mur ligase family, catalytic domain 303 380 IPR000713 GO:0009058|GO:0016881
Aev03g3073 804 MobiDBLite consensus disorder prediction 245 262 - -
Aev03g3073 804 Gene3D - 614 791 IPR036615 GO:0009058|GO:0016881
Aev03g3073 804 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 280 780 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Aev03g3073 804 Gene3D - 383 612 IPR036565 GO:0005524|GO:0009058
Aev03g3073 804 SUPERFAMILY MurD-like peptide ligases, catalytic domain 383 606 IPR036565 GO:0005524|GO:0009058
Aev03g3073 804 Gene3D - 281 381 - -
Aev03g3073 804 Pfam Mur ligase middle domain 392 588 IPR013221 GO:0005524|GO:0009058|GO:0016881
Aev03g3073 804 PANTHER MUR LIGASE FAMILY MEMBER 258 794 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g3073 - - qlo:115971280 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g3073 03 29513879 29516946 Aev03g3073 03 29513879 29516946 ECH