Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2904 ATGAAGGGTGGGACAGTTCAGATCTGCTGGCACGAGGGTACGCCCATCTTAACCCTCGATTTCCACCCTCCCTCCGCCACCCTCGCCACCGCCGGCGCCGATTTCGAAATCAAGTTTTGGTCGGTTACACCATCAGGACCAGAGAAGAAGCTACCCGTTGTTACCTATCTCAACTGCGTGACTTACCAACGTACCGCCATCAATGTTATTCGCTTCTCTTCTTCCGGGGAACTACTGGCCTCTGGTTTAGATGGCGGCGACCTGATAATATGGAAGTTAAATTCGACAGATAATAGCCAGATATGGAAAGTTCTCAAGATGTTGAGATCTCATAACAAAGACATTCTGGACCTGCAGTGGTCTGCTGACTCCTCGTATATCATATCTGGGTCAGTTGATAATTCATGCATTATATGGGATGTAAACAAAGGCACGTACCTTCAAAAGTTGGATGCCCATGCACATTATGTTCAGGGGGTTGCATGGGACCCTCTAGGGAAATATGTTGCCTCTATTAGTTCTGACAGGACATGCCGAATTTACATGAATAAGCCCCACAAATCAAAGGGAATTGAGAAGCTCAATTATGTCTGTCAGCAAGTTATTTCCAAAGCAGAACAGCCATTGTTACAGAATTCTAAGTCCACGAAATACCATCTCTTCCATGATGAGACATTGCCATCTTTCTTCAGAAGATTAGCCTGGTCTCCGGATGGTTCATTTTTAGTTGTGCCGGCAGGCTCTTACAAAATTGGTACTGCTTCAGAATCTGTAAATGCGGCTTATGTATTTTCTAGAAAAGATCTTTCTCGGCCCGCTATACAGCTTCCGTGTGCAAACAAAGCTGTTATTGCTGTACGGTTCTGCCCTATATCTTTTAAACTCCGGGGAACAATCTCAGGTGGATTGTTTAAGCTACCATATCGCATCATATTTGCTGTGGCCACGTTGAATTCATTGTACATTTATGATACTGAGAGCAATCCTCCAATAGCTGTATTAGCTGGTCTTCACTATGCAACAATAACAGACATCACCTGGTCATCCGATGGCCACTATTTGGCATTGTCTTCACAAGATGGTTTCTGCTCTTTGGTTGAATTTGAAAATGATGAACTCGGAACACCTTACTCAGATGGAAAGGTCTCAAACAAGGATAGTAAAAGCCCCTTGCAAACAGCCAACGACACTGTCATCGTACCATCTGGTAATGCTGGTGTAGTTATAGCAGAAAACAGGAAAACAGAAGCAGAAGAAAAGGCTGATGACGTGGTTGTCGAGTCAGCAGGGAATGTGCAACCAGCGATGGTGGATGGTAGGAAAAATGAAGTTGAAGATAAAGCTGATGTCCTGTCGGTTGAGGCAACCGGAAACGTTGAAAGGGTTATATCAGATAGTAGGAAAAATGAAGCAGAAGAGAAGGCGGAGAAACAGGGATCAAGTTCAGGTAGTGTAAAATGTGGAGCAGAAGAGAAGGCAGAGAAACCGCAATCTAGTTTAGATCGTGTAAAATCAGGGCCAGAAGCAAAAGCAGGGACACAATCTTCCAGTTCAACTAGTACTCCCACCTCAAATAAGCCAGCAAGGAAGCGTATTACTCCCATTGCAATTGATCCATGA 1620 0.4438 MKGGTVQICWHEGTPILTLDFHPPSATLATAGADFEIKFWSVTPSGPEKKLPVVTYLNCVTYQRTAINVIRFSSSGELLASGLDGGDLIIWKLNSTDNSQIWKVLKMLRSHNKDILDLQWSADSSYIISGSVDNSCIIWDVNKGTYLQKLDAHAHYVQGVAWDPLGKYVASISSDRTCRIYMNKPHKSKGIEKLNYVCQQVISKAEQPLLQNSKSTKYHLFHDETLPSFFRRLAWSPDGSFLVVPAGSYKIGTASESVNAAYVFSRKDLSRPAIQLPCANKAVIAVRFCPISFKLRGTISGGLFKLPYRIIFAVATLNSLYIYDTESNPPIAVLAGLHYATITDITWSSDGHYLALSSQDGFCSLVEFENDELGTPYSDGKVSNKDSKSPLQTANDTVIVPSGNAGVVIAENRKTEAEEKADDVVVESAGNVQPAMVDGRKNEVEDKADVLSVEATGNVERVISDSRKNEAEEKAEKQGSSSGSVKCGAEEKAEKPQSSLDRVKSGPEAKAGTQSSSSTSTPTSNKPARKRITPIAIDP* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2904 539 ProSitePatterns Trp-Asp (WD) repeats signature. 127 141 IPR019775 -
Aev03g2904 539 MobiDBLite consensus disorder prediction 461 479 - -
Aev03g2904 539 PRINTS Beta G protein (transducin) signature 127 141 IPR001632 -
Aev03g2904 539 PRINTS Beta G protein (transducin) signature 108 124 IPR001632 -
Aev03g2904 539 PRINTS Beta G protein (transducin) signature 164 181 IPR001632 -
Aev03g2904 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 60 101 IPR001680 GO:0005515
Aev03g2904 539 Gene3D - 2 183 IPR015943 GO:0005515
Aev03g2904 539 Gene3D - 184 394 IPR015943 GO:0005515
Aev03g2904 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 150 181 IPR001680 GO:0005515
Aev03g2904 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 42 IPR001680 GO:0005515
Aev03g2904 539 MobiDBLite consensus disorder prediction 461 539 - -
Aev03g2904 539 ProSiteProfiles Trp-Asp (WD) repeats profile. 108 149 IPR001680 GO:0005515
Aev03g2904 539 MobiDBLite consensus disorder prediction 509 528 - -
Aev03g2904 539 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 108 144 - -
Aev03g2904 539 SUPERFAMILY WD40 repeat-like 10 365 IPR036322 GO:0005515
Aev03g2904 539 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 538 IPR045145 GO:0006335
Aev03g2904 539 Pfam WD domain, G-beta repeat 103 140 IPR001680 GO:0005515
Aev03g2904 539 Pfam WD domain, G-beta repeat 146 181 IPR001680 GO:0005515
Aev03g2904 539 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
Aev03g2904 539 SMART WD40_4 101 140 IPR001680 GO:0005515
Aev03g2904 539 SMART WD40_4 327 367 IPR001680 GO:0005515
Aev03g2904 539 SMART WD40_4 2 41 IPR001680 GO:0005515
Aev03g2904 539 SMART WD40_4 55 92 IPR001680 GO:0005515
Aev03g2904 539 SMART WD40_4 143 182 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2904 16 181 Miscellaneous Gene Families AT5G08390 23.494 1.59e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2904 K10751 - gmx:547606 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2904 03 28368993 28372488 Aev03g2904 03 28368993 28372488 ECH