Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2893 ATGCCCGTTCAGGACGCGGAGCTGAAGACGGCGAAGGCGGCGTACCGGAACGCCAAGGCGGAGGGTAACCACCGCGAAGAAGCTCGTTGGGCCAACGTCATCGGGGACATCCTCAAAAACAGAGGAGAGTACGTCGAAGCCCTCAAATGGCTCCGAATCGATTACGAAGTCTCACTCAAGCACTTGCCGGAGAAGCACTTGCTCCCAACGTGTCAATCCCTCGGCGAAATCTACCTCCGCCTCGAACACTTCACCGACGCCCTAATTTACCAGAAGAAGCACTTGGAGCTCGCGAGGGACGCTGATGATATCGTTGAGCAGCAGAGAGCGAGCACTCAGCTAGGTCGCACCTACCACGAGCTGTTCTCGAGATCAGATCATGATCACAACTCAATTCGCAACGCGAAGAAGTATTTCAAGTGTGCGATGGATCTCGCGGTGATTCTGAAGCAGAATCCTCCGGACAACAAGTCCTCGTTTTTGAAGGAGTACATTGATGCACATAACAACATAGGGATGCTTGAAATGGAACTTGATAACTTGCAGGATGCGCAGAAGATTTTGACTCGAGGGTTGGAGATTTGTGATGAAGAGGAAGTTAGTGAATATGATGATGGGAGAAGCAGGTTACACCATAATCTTGGGAATGTGTACATGGAACTAAGGAATTGGGGGGAAGCTAGGAGGAATATCAAAAGGGACATTGTGATTTGTAACAGGATTGGGCACCGTCAAGGGGAAGCGAAAGGGTTTATCAATCTTGGTGAAGTCCATTATAGGACTCAGAAGTATGAAGAAGCAAGGTCATTTTATGAGAAGGCACTTGCTTTGGCAAAGTCTTTGGAGGATGAAGATGCTTTGGTCAAGCAGATTGAGCAGAATATTAAGACCGTGAGAGAAGCTACCAAAGTCATGGATGCGATAAAGATGGAAGAGCAGAACCTAAAGAAGCTTAAAAGGGAAATTGCCAATGCAAGAGGGACACCCAATGAGCGGAAATGTTTGCTTCAGCAGAATGCATCTCTTGAGCGCCTTGTTGAGAAATCAAGGATGATCTCTTCATGGGAGAAGTATTGTGGATTTGCAAAGGAAAGGAAGAGAATAGCAAGTGAACTTTGTGACAAGCAAAGGCTGGGTGATGCATACCTGGATGTTGGAGAATCATACCAGAAGCTTAGAAAGTTCAACAAAGCACTCAAATGGTACCAAAAGAGTGGGGAAATGTACAGAACAATTGGTAACTTAGAGGGGCAAGCACTAGTGAAAATAAATATTGGCAATGTTTTGGATTCTGTTCACAATTGGAGAGGAGCATTAGATGCATTTACAGAGAGTTACAGGGTTGCTGTTGAAGCTGACCTTCCTGAATTACAACTTTCTGCCTTGGAAAATATGCATTATAGCAACATGATAAGATTTGATGATGAAGATGAGACCAGGAGGTTGAAAATTCTTATTGATAAACTCAAAAAATTAATAGAAAAAGACCCACAAGGTAGAAACATGCCGGAGGATTGTTGCTCTGAGACTGATACTGAAGCAGATGATGATCTGTCAAACTCTGGGTATGAAGATTTCTGCTCTCCAAATACCATTTCTAGGCCAAAATCTCTGGCTACTGGAGAAGAATGGCAAGATGACATGCCACTTACATCACTCTATCAGTCCATAAAAGGCTCGTCGAGAAAGAGAGCAGGCCTCATGGAATGTGTTACCAACTCTTCCAAGCAAGCTGATCCCTCACCCAAAAGTCTGACAAATTTAACTAGCAATCATCAGGCAGTTGTTGGTCGCAAACGTGTCCGAGTGATTCTTTCTGATGACGATGATGATGAGATGGAATGTTCAAGCAGAAAGGATCCCGATTGCCTTTTAGAAGACAAGTCCACTTATGATTCAAATAAAAGTAAAACTAGTCATTGCAATATTCAGGTTGCTCTTGAGAATGGATCCAAATCTGCAATTAATGTTGAAGAAAGTAGTAGTTCTTTCAAATGCTGGAGTCCACAGAGAACCATTAACACCAGAAGACATTCCAGATCTTTGAGCAATGACTTAATTGCTGAACTTGATTTTCCGAGTGGTTCTAAATGTAATACAGATGTCTCTGGCAAACAAAATGATTCTACCCATCCTGTGTTGCATAATTCCCAAAATGATTTGCAGCAATATATTACATGCCGGATTGGGAATAATCTAGTTCACGTAGAAGAAACCTGGTTTACTGCTTCTGATCAGTTGGATATTGAGTCTTTGAAAGCTGCAGTCGCATGCTCATACTACCTACAGCTTCCTACCCAAAAGAGATCAGATGGTTTATTGCCCGTTGTTCAGCACATAAAATGTGCTGGGAGAGATCTAGAATCCTTGGAAACTGTTGAAAACCTTAAGCAACATCTGGGAAATGACACAGTTGAAGCTTCCATTGATGGATGGATTCAGAAGCGTCTAATAAAACTGTATATAGACTTCTGCAAGCAGTTGTCTGAGGTGCCAAACATGAAGGTATTGAAGAAACTTTACAATTTAGAGGTTTCAGATGATGAAATCACTGTGTCTGAGTGTGACCTGCAAGATTTATCCATAACCCCATTGATAAATGCATTGCAGTCCCAAAAAGCATTTTCAATGCTTGACCTCTCCCACAATTTGTTAGGAAATGGGACAATGGAGACACTTCAGAAGGTTTTCACAGCGTCAGACCAGCATTATGGTGACTTAACTCTGGATTTGCATTGCAATCGATTTGGCCCAACAGCATTGCTACAGATTTGTGAATGCTCAGTTCTATTTGATCGACTGGAAGTTCTTAACATTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATATTGAAAAAATGTACAGCACTGTGTAGCTTGAATGTTGAGAACTGTTGTATCACATCCAGGACAATTCAAAAGATTTCTGATGCATTGGATTCTAGATCTGTACTTGCACATCTTTGTATAGGACATAACAGCCCAGTATCTGGAAATGCTATAGTTAATCTTCTATCCAAGCTTTCTACTCTGAAAAGGTTTTCTGAGCTGAATCTCAGTGGCCTAAAACTAGGTAAACCAGTTGTCGATACCCTTTGCCAGCTTGCAGGTACCTTGACTTTATCAGGACTAGTGCTTGGAGGCACGGGAATTGGAACAGATGGGGCGACAGAATTAGCAGAATCATTGCTCAAAGGGACTGAAGAGCTTGTGAAACTTGACCTATCATATTGTGGGCTCACATCAAACTATGTTTTAAACATCAATGTCAATTTCTTTTGTTCCATCCTTGAGCTGAACCTAGAAGGAAATCCTATCATGCCTGAGGGCAGCAATACTCTGTTTTCTCTTCTCATAAACCCAGAATGTCGTGTCAAAGGTTTGGTCCTTAGAAAGTGCCAACTTGGGCTTGCTGGAGTTCTTCACATAATTGAGGCACTGGCAGAGAACAGCAGCCTAGAGGAGCTTAATCTTGCAGGTAATCCTGCTCCAAATGAACTTTATACTCCAAAATCAGACTCATCAGTCAAAAGCTGCTCAGAAAACCGGGAGCAGAAACTCGACATGATGAAAGTAGATGGTAATCAAGAGGCCCTTTGCCCTGTAGACTTGGACTACAGTCTGCTTGAAGTTGCTGACAGTGAAGATAGTCCAGTTAGAGTAGATGCTAATGCTTCTGGAGTCGATGACAGCTGTGCCAGTTCATGTCAAAGAAATTCATCTCACGAGTGCCTCTTCACTCAGCAATTTTCAATTGCAATTGGTAAAGCAAAGAACTTGCAATTCCTTGACCTTAGCAATAATGATTTTTCAGCGCAAGCTGCAGAAACTTTCTATAATTCATGGACAAGTTTACGGCCTTCGAGTCAGAAGCACGTTACTCAGCACATTATTCATTTCTCAACAACGGAAAATAAGTGCTGCAGAGTGAAACCATGCTGCAAGAGAATTTGA 3969 0.4253 MPVQDAELKTAKAAYRNAKAEGNHREEARWANVIGDILKNRGEYVEALKWLRIDYEVSLKHLPEKHLLPTCQSLGEIYLRLEHFTDALIYQKKHLELARDADDIVEQQRASTQLGRTYHELFSRSDHDHNSIRNAKKYFKCAMDLAVILKQNPPDNKSSFLKEYIDAHNNIGMLEMELDNLQDAQKILTRGLEICDEEEVSEYDDGRSRLHHNLGNVYMELRNWGEARRNIKRDIVICNRIGHRQGEAKGFINLGEVHYRTQKYEEARSFYEKALALAKSLEDEDALVKQIEQNIKTVREATKVMDAIKMEEQNLKKLKREIANARGTPNERKCLLQQNASLERLVEKSRMISSWEKYCGFAKERKRIASELCDKQRLGDAYLDVGESYQKLRKFNKALKWYQKSGEMYRTIGNLEGQALVKINIGNVLDSVHNWRGALDAFTESYRVAVEADLPELQLSALENMHYSNMIRFDDEDETRRLKILIDKLKKLIEKDPQGRNMPEDCCSETDTEADDDLSNSGYEDFCSPNTISRPKSLATGEEWQDDMPLTSLYQSIKGSSRKRAGLMECVTNSSKQADPSPKSLTNLTSNHQAVVGRKRVRVILSDDDDDEMECSSRKDPDCLLEDKSTYDSNKSKTSHCNIQVALENGSKSAINVEESSSSFKCWSPQRTINTRRHSRSLSNDLIAELDFPSGSKCNTDVSGKQNDSTHPVLHNSQNDLQQYITCRIGNNLVHVEETWFTASDQLDIESLKAAVACSYYLQLPTQKRSDGLLPVVQHIKCAGRDLESLETVENLKQHLGNDTVEASIDGWIQKRLIKLYIDFCKQLSEVPNMKVLKKLYNLEVSDDEITVSECDLQDLSITPLINALQSQKAFSMLDLSHNLLGNGTMETLQKVFTASDQHYGDLTLDLHCNRFGPTALLQICECSVLFDRLEVLNISGNRLTDACGSYLSTILKKCTALCSLNVENCCITSRTIQKISDALDSRSVLAHLCIGHNSPVSGNAIVNLLSKLSTLKRFSELNLSGLKLGKPVVDTLCQLAGTLTLSGLVLGGTGIGTDGATELAESLLKGTEELVKLDLSYCGLTSNYVLNINVNFFCSILELNLEGNPIMPEGSNTLFSLLINPECRVKGLVLRKCQLGLAGVLHIIEALAENSSLEELNLAGNPAPNELYTPKSDSSVKSCSENREQKLDMMKVDGNQEALCPVDLDYSLLEVADSEDSPVRVDANASGVDDSCASSCQRNSSHECLFTQQFSIAIGKAKNLQFLDLSNNDFSAQAAETFYNSWTSLRPSSQKHVTQHIIHFSTTENKCCRVKPCCKRI* 1323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2893 1322 Gene3D Tetratricopeptide repeat domain 301 470 IPR011990 GO:0005515
Aev03g2893 1322 SUPERFAMILY RNI-like 840 1289 - -
Aev03g2893 1322 SMART tpr_5 419 452 IPR019734 GO:0005515
Aev03g2893 1322 SMART tpr_5 379 412 IPR019734 GO:0005515
Aev03g2893 1322 SMART tpr_5 165 198 IPR019734 GO:0005515
Aev03g2893 1322 SMART tpr_5 248 281 IPR019734 GO:0005515
Aev03g2893 1322 SMART tpr_5 208 241 IPR019734 GO:0005515
Aev03g2893 1322 SMART tpr_5 68 101 IPR019734 GO:0005515
Aev03g2893 1322 Gene3D Ribonuclease Inhibitor 786 1214 IPR032675 -
Aev03g2893 1322 SUPERFAMILY TPR-like 14 153 IPR011990 GO:0005515
Aev03g2893 1322 SUPERFAMILY TPR-like 164 447 IPR011990 GO:0005515
Aev03g2893 1322 Gene3D Tetratricopeptide repeat domain 4 160 IPR011990 GO:0005515
Aev03g2893 1322 SMART LRR_RI_2 959 986 - -
Aev03g2893 1322 SMART LRR_RI_2 1098 1125 - -
Aev03g2893 1322 SMART LRR_RI_2 1262 1289 - -
Aev03g2893 1322 SMART LRR_RI_2 872 899 - -
Aev03g2893 1322 SMART LRR_RI_2 1043 1070 - -
Aev03g2893 1322 SMART LRR_RI_2 931 958 - -
Aev03g2893 1322 SMART LRR_RI_2 1127 1154 - -
Aev03g2893 1322 Gene3D Tetratricopeptide repeat domain 161 300 IPR011990 GO:0005515
Aev03g2893 1322 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Aev03g2893 1322 Coils Coil 164 184 - -
Aev03g2893 1322 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Aev03g2893 1322 MobiDBLite consensus disorder prediction 497 526 - -
Aev03g2893 1322 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Aev03g2893 1322 Pfam Tetratricopeptide repeat 208 280 - -
Aev03g2893 1322 PANTHER PROTEIN TONSOKU 1 1321 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Aev03g2893 1322 Coils Coil 264 328 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2893 - - gmx:100805682 2062.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2893 03 28278048 28285975 Aev03g2893 03 28278048 28285975 ECH