Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2760 ATGCATTTGGGTTCGTCTGATATGTTTCAAAGTGTTGGGGCACGTCGCCTCCTATACCGTTCTCAGATAACACACTACGTGAAAGCAGGTCTTATCGACAATGCCATCAAAGTGTTCGACGAAATGACCCAATCAAACTGCCGCATGTTCAGCCTTGATTACAACCGCTTCATCGGTGTGCTCCTCCGCCAGTCACGCTTCGACCTCGCCGAGCACTACTACTTCCACCACGTCATCCCCCATGGCTTCTCCCTCTCCCCATTCACCTACTCCCGCTTCATCTCAGGCCTCTGCAGGGTCAGGAACTTCACCCTCATTAACAAGCTTCTGCGCGACATGGACTCCCTTGGCTGCGTCCCCGACATTTGGGCGTTCAACATCTACTTGGACCTATTGTGCTGCGAGAATCGTTTGGACGATGCTTTGGAACTGTTCCATTCTTTGTCCAGCAAGGGAAGGGACCCTGATATTGTTAGTTACACTATCCTCATTGATGCATTCTGCAAGTCCAGGCGGTTTGATGAGGCTGCTGCGGTTTGGCGTAGTTTGATTGATCAGGGGATGAGCCTTGATTGTAAGGCTTGTGGCGCTCTTGTGATTGGTCTGTGCTCTGGTGGTAATGTTGATTTGGCTTATGAGCTTGCTGTTGATGTGATCAAGGGTGGTGTGAAGGTCAATAGTTTGGTTTATAATGCTTTGATTGGTGGGTATTGTAGGATGGGGAAGATTGATAAGGCACTCGCAATTAAGGCATTTATGAGCAGGAATGGGTGCGCTCCGGATTTGGTGACTTATAACATCTTGTTGAATTATTGTTGTGATGAGCTTATGCTGGATGAGGCAGTGAGGTTGGTAGATAAAATGGAGAGGAGCGATGTGGAGCCAGATTTGTATAGTTATAATGAGCTGCTTAAGGGCTTTTGTAAGGCTAACCAAGTGGAAAGGGCTTATTTGATATTGGTTGACAGGATGCAGGCCAAAGGGTTCTGTGACGTTGTTTCTTACAATACCATTATCAATGCATTTTGTAAGGCACGACAAACTAGGAGGGCTTATGATTTGTTTGAGGAAATGCATAGGAAGGGGATTCAACCGGATGTAGTGACATTTACAATCCTTGTAGAAGCATTTCTGAGAGAAGGAAGTTCCAATGTGGCCAAGAAACTTCTTGATCAAATGACCAGGATGAATCTTGTTCCTGATCATGTATTCTATACGACAATAGTTGATCACCTTTGCAAGACTGGGAAGATTGACATGGCTCATAGCATTTTCCGTGACATGGTGGAGAATGGAACAACTCCAGATGTGATCTCTTACAATGCCCTCATAAATGGGTTTTGCAGGGCTTCTAGAGTCACAGATGCCATGCATCTATATGATGAAATGCAAGTGAAAGCATTATACCCTGATGAGGTAACTTTCAAGTTGATAGTTGGAGGGCTTATAAGGGAAAAGAAGCTTTCAATTGCCTGTAAGGTTTGGGATCAGATGATGGAAAAGGGCTTTACGCTTGACAGGCATCTTTCTGAGACACTGATAAATGCCATTAAGTCAAGTGATGGCACATGA 1572 0.4523 MHLGSSDMFQSVGARRLLYRSQITHYVKAGLIDNAIKVFDEMTQSNCRMFSLDYNRFIGVLLRQSRFDLAEHYYFHHVIPHGFSLSPFTYSRFISGLCRVRNFTLINKLLRDMDSLGCVPDIWAFNIYLDLLCCENRLDDALELFHSLSSKGRDPDIVSYTILIDAFCKSRRFDEAAAVWRSLIDQGMSLDCKACGALVIGLCSGGNVDLAYELAVDVIKGGVKVNSLVYNALIGGYCRMGKIDKALAIKAFMSRNGCAPDLVTYNILLNYCCDELMLDEAVRLVDKMERSDVEPDLYSYNELLKGFCKANQVERAYLILVDRMQAKGFCDVVSYNTIINAFCKARQTRRAYDLFEEMHRKGIQPDVVTFTILVEAFLREGSSNVAKKLLDQMTRMNLVPDHVFYTTIVDHLCKTGKIDMAHSIFRDMVENGTTPDVISYNALINGFCRASRVTDAMHLYDEMQVKALYPDEVTFKLIVGGLIREKKLSIACKVWDQMMEKGFTLDRHLSETLINAIKSSDGT* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2760 523 Gene3D Tetratricopeptide repeat domain 396 466 IPR011990 GO:0005515
Aev03g2760 523 Gene3D Tetratricopeptide repeat domain 320 395 IPR011990 GO:0005515
Aev03g2760 523 Gene3D Tetratricopeptide repeat domain 467 521 IPR011990 GO:0005515
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 401 435 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 296 327 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 121 155 IPR002885 -
Aev03g2760 523 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 10 521 - -
Aev03g2760 523 Pfam PPR repeat 23 47 IPR002885 -
Aev03g2760 523 Pfam PPR repeat 88 118 IPR002885 -
Aev03g2760 523 Pfam PPR repeat 473 503 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 86 120 IPR002885 -
Aev03g2760 523 Gene3D Tetratricopeptide repeat domain 218 319 IPR011990 GO:0005515
Aev03g2760 523 Gene3D Tetratricopeptide repeat domain 73 217 IPR011990 GO:0005515
Aev03g2760 523 Pfam PPR repeat family 120 169 IPR002885 -
Aev03g2760 523 Pfam PPR repeat family 400 449 IPR002885 -
Aev03g2760 523 Pfam PPR repeat family 260 309 IPR002885 -
Aev03g2760 523 Pfam PPR repeat family 331 377 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 15 49 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 331 365 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 404 437 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 298 330 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 229 261 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 473 506 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 438 472 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 333 367 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 263 296 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 368 401 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 23 48 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 158 192 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 88 122 IPR002885 -
Aev03g2760 523 TIGRFAM PPR: pentatricopeptide repeat domain 124 156 IPR002885 -
Aev03g2760 523 Pfam PPR repeat 222 248 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 471 505 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
Aev03g2760 523 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 10 521 - -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 366 400 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 156 190 IPR002885 -
Aev03g2760 523 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 470 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2760 257 520 Glycosyltransferase AT1G05670 28.302 1.25e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2760 - - aprc:113872581 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2760 03 27448248 27449819 Aev03g2760 03 27448248 27449819 ECH