Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2757 ATGCATTTAGAGCCGGAGTTTTGGACAGCTTTGGTTGTCATATTGTGTTTTCTTGGCTTGATTCTGAAGGAGAGTATTATGGGAGGTAAGAATTCAAGAGAGGCTTCTGCAAGTAGGAGGCATGTTTCATCTCCTTCATCTTCATGGGATAATAACTATGGATACCCTCAGTCACCATATCCATCATCATCATCATATCCATATCATCAAACGCCTACTCAACACCGTGCACCTGCTCCACCAGCTCAGTATAATTACCAATATGCACAGCCAAAAAGGAGGTTGGACAGGAGATATTCGAGGATTGCTGACGATTACCGTTCGCTGGACGAGGTTACTGCTGCTCTTTCACAAGCTGGCTTGGAATCATCTAATCTCATTGTAGGCATTGATTTCACCAAGAGCAATGAGTGGACAGGGAAGAGATCATTCAACCGAAAAAGCTTACATCACATTGGAAATGGTCAGAATCCTTATGAACAAGCAATCTCAATTATTGGGAAAACTCTATCTGTCTTTGATGAGGATAACTTGATTCCTTGTTTTGGATTTGGAGATGCATCAACACATGATCAAGATGTCTTCAGCTTCTATCCAGATAACAGGTTCTGCAACGGATTCGAGGAAGTTTTGCAAAAATACAGAGAAATCGTTCCTCGCCTCCGCCTCGCAGGACCCACTTCATTTGCCCCTATCATTGAGATGGCCATGACTATTGTTGAGCAAAGTGGTGGCCAATACCATGTCTTGCTAATAATTGCTGATGGACAGGTGACCAGAAGTGTTGACACACAGCATGGCCAATTAAGTCCACAAGAACAGAAGACAATTGATGCAATTGTAAAAGCCAGTGAGTATCCGTTGTCAATAGTGTTGGTGGGAGTTGGAGATGGACCATGGGATATGATGAGGGAATTCGATGATAACATTCCGGCTCGAGCCTTCGACAATTTTCAGTTTGTGAATTTTACCGAAATAATGTCAAGGAGTATAGATTTATCCAGGAAAGAGACAGAGTTTGCTCTAGCAGCTTTGATGGAGATACCTTCTCAATATAAGGCAACCATAGACCATGGCATATTAGGTGCACGGAGGGGACATTCGCCGGACCGCGTTGCCCTACCACCACCTCAGTATGACAGGACTTCTTCTAGCAGCAGCACAACATATTCTCGTTCGAATAGTTTCCAGCAGAGTACACCTATAAATACTTCCTATGATAACGGAGTTAGCACAGAACCATCTTCAAGTGGCTCATATGACAACAAGATTTGCCCTATATGTCTCAGTAATGGGAAGGATATGGCCTTCGGTTGCGGGCATCAGACTTGTTGTGACTGCGGAGAAAACCTTGAATTCTGCCCCATTTGTAGGAGCACAATTAATACTAGAATAAAGCTTTACTAG 1407 0.4321 MHLEPEFWTALVVILCFLGLILKESIMGGKNSREASASRRHVSSPSSSWDNNYGYPQSPYPSSSSYPYHQTPTQHRAPAPPAQYNYQYAQPKRRLDRRYSRIADDYRSLDEVTAALSQAGLESSNLIVGIDFTKSNEWTGKRSFNRKSLHHIGNGQNPYEQAISIIGKTLSVFDEDNLIPCFGFGDASTHDQDVFSFYPDNRFCNGFEEVLQKYREIVPRLRLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGQLSPQEQKTIDAIVKASEYPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSRSIDLSRKETEFALAALMEIPSQYKATIDHGILGARRGHSPDRVALPPPQYDRTSSSSSTTYSRSNSFQQSTPINTSYDNGVSTEPSSSGSYDNKICPICLSNGKDMAFGCGHQTCCDCGENLEFCPICRSTINTRIKLY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2757 468 MobiDBLite consensus disorder prediction 38 80 - -
Aev03g2757 468 MobiDBLite consensus disorder prediction 366 419 - -
Aev03g2757 468 PANTHER COPINE FAMILY PROTEIN 1 27 468 - -
Aev03g2757 468 Pfam Zinc finger, C3HC4 type (RING finger) 422 462 - -
Aev03g2757 468 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 404 468 IPR013083 -
Aev03g2757 468 MobiDBLite consensus disorder prediction 32 83 - -
Aev03g2757 468 MobiDBLite consensus disorder prediction 378 419 - -
Aev03g2757 468 Pfam Copine 148 361 IPR010734 -
Aev03g2757 468 ProSiteProfiles Zinc finger RING-type profile. 425 458 IPR001841 -
Aev03g2757 468 SUPERFAMILY RING/U-box 420 464 - -
Aev03g2757 468 SMART VWA_4 123 326 IPR002035 -
Aev03g2757 468 SUPERFAMILY vWA-like 124 307 IPR036465 -
Aev03g2757 468 CDD vWA_copine_like 102 352 IPR010734 -
Aev03g2757 468 CDD RING-HC_RGLG_plant 425 468 IPR045317 GO:0061630|GO:0070534
Aev03g2757 468 PANTHER RING-FINGER PROTEIN 27 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2757 Aev-Chr3 27434443 27437519 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2757 K16280 - gmx:100800161 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2757 03 27434443 27437519 Aev03g2757 03 27434443 27437519 ECH