Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2752 ATGAGGACTAATATTATTCAGTCCTGGCTAAAAACATGCTCCACCGCCAACTGCGCCACCGCCACCCACCAATCCACCATCTCCATACCCCACAACAAACAACAACAGCAGCATGCACCATCAGACACAAGCAACTACTCCTCCGGATCAGAAGCGCCAACGTCTTCCACAACCTCTCAGGACAGCTCCGCCACCCTCCGCAGCGACCTCTCCATACAGACCCTCCCTTCCGTTCCTTCACTCCAGAGACTCACTCCACAAGCCCTAAACTTCTCCGTCTCCCACCATTGCCGAACAACACTCACACCACAGCCCTCACGCCCCGTCACATCCCTCGCCGTCCACGGCGACCTCCTCTACGCCGCAACCGCTCACGAAATCAACGTCTACGATCGCCACACGTGCACCACCCTCCAAACACTAAACGCAGAATCCGAATCCTCTGGCTCCACCAAAGCCATCACCTTCTGCAATGAAATGGTCTTCACCACTCACCAAGACTGCAAGATCCGCGTCTGGCAAAACAACCGTTTATTAACGTCCCTTCCAACCGTCAACGACCGTCTTCGCCGTTTCCTCCTCCCGAAGAACTACGTAACCGTCCGGCGCCACGAGAAGAAGCTCTGGATCGAGCACGCTGACGCCGTCACTGGACTCGCCGTCTCCAAAGTTAACGGCGTTATGTACTCCGTTTCGTGGGATAAAACACTGAAAGTGTGGCGAGTCTCTGACCTTCGTTGTTTGGAGTCGGTGAAGGCTCACGAGGACGCGGTCAACGCGGTCGCAGTGTCCAACGATGGAACCGTCTACACTGGATCCGCTGACAGGAGGATACGGGTTTGGGCCAGGCCCAAAAGAGAGAAGCGTCACGCGCTGGTTGCGACGCTGGAGAAGCACAGGTCTGCGGTTAACGCGCTGGCGCTAAACGACGACGGTTCGTTGCTGTTTTCGGGCGCGTGTGACCGTTCCATATTGGTGTGGGAGAGGGAGGACAGCGCGAATCATATGGTTCTGAGTGGGGCCCTCAGGGGGCATCACAAGGCGATACTGTGTTTGATCAACGTCTCTGATTTGTTGTTTAGTGGGTCCGCTGATCGAACGGTCAGGATCTGGAAGCGGGGATTTGATGGACAGTTTTGCTGCTTATCTGTTCTTGCTGGACACAGGAAACCGGTGAAGTCCTTGGCGGCAGTACAAGAGTGCCAAAACGGTGCCGTATCGGTCTTCAGTGGGTCGCTTGATGGTGAGATAAAGATTTGGCAGGTTTCCATCACGAGAATCGACGCACCTGATCAGAAATTGAATTGCTAG 1311 0.55 MRTNIIQSWLKTCSTANCATATHQSTISIPHNKQQQQHAPSDTSNYSSGSEAPTSSTTSQDSSATLRSDLSIQTLPSVPSLQRLTPQALNFSVSHHCRTTLTPQPSRPVTSLAVHGDLLYAATAHEINVYDRHTCTTLQTLNAESESSGSTKAITFCNEMVFTTHQDCKIRVWQNNRLLTSLPTVNDRLRRFLLPKNYVTVRRHEKKLWIEHADAVTGLAVSKVNGVMYSVSWDKTLKVWRVSDLRCLESVKAHEDAVNAVAVSNDGTVYTGSADRRIRVWARPKREKRHALVATLEKHRSAVNALALNDDGSLLFSGACDRSILVWEREDSANHMVLSGALRGHHKAILCLINVSDLLFSGSADRTVRIWKRGFDGQFCCLSVLAGHRKPVKSLAAVQECQNGAVSVFSGSLDGEIKIWQVSITRIDAPDQKLNC* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 209 250 IPR001680 GO:0005515
Aev03g2752 436 PANTHER F21J9.19 21 426 - -
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 342 372 IPR001680 GO:0005515
Aev03g2752 436 Gene3D - 199 286 IPR015943 GO:0005515
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 385 423 IPR001680 GO:0005515
Aev03g2752 436 SUPERFAMILY WD40 repeat-like 104 422 IPR036322 GO:0005515
Aev03g2752 436 Pfam WD domain, G-beta repeat 293 327 IPR001680 GO:0005515
Aev03g2752 436 Pfam WD domain, G-beta repeat 246 281 IPR001680 GO:0005515
Aev03g2752 436 Pfam WD domain, G-beta repeat 380 420 IPR001680 GO:0005515
Aev03g2752 436 Pfam WD domain, G-beta repeat 341 372 IPR001680 GO:0005515
Aev03g2752 436 Pfam WD domain, G-beta repeat 211 240 IPR001680 GO:0005515
Aev03g2752 436 PRINTS G protein beta WD-40 repeat signature 408 422 IPR020472 -
Aev03g2752 436 PRINTS G protein beta WD-40 repeat signature 228 242 IPR020472 -
Aev03g2752 436 PRINTS G protein beta WD-40 repeat signature 359 373 IPR020472 -
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 296 328 - -
Aev03g2752 436 MobiDBLite consensus disorder prediction 27 66 - -
Aev03g2752 436 SMART WD40_4 244 282 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 202 241 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 378 421 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 289 328 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 335 372 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 94 131 IPR001680 GO:0005515
Aev03g2752 436 SMART WD40_4 134 174 IPR001680 GO:0005515
Aev03g2752 436 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 21 426 IPR045182 -
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 296 337 IPR001680 GO:0005515
Aev03g2752 436 CDD WD40 97 421 - -
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 342 372 - -
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats profile. 251 281 IPR001680 GO:0005515
Aev03g2752 436 Gene3D - 287 433 IPR015943 GO:0005515
Aev03g2752 436 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 251 281 - -
Aev03g2752 436 Gene3D - 88 192 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2752 Aev-Chr3 27413550 27414860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2752 245 421 Acyl Lipid Metabolism Gene Families AT3G18860 28.261 1.98e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2752 - - gmx:100817776 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2752 03 27413550 27414860 Aev03g2752 03 27413550 27414860 ECH