Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2744 ATGTATCACCGTGAAGAAAGGGCAAATCAAAATCGGAAGGAAAAGCCTAGCCTATCATCTGCAGGAAAAAGATATAGCATATGTTCCTTTGCCAAGAAGTCGTTGAAGAAATCCAAAAGAAATGTACCAGAGACATCTGAGGATCTCTCAGAGGACAAATTTGTTCAAAATGACATGTTGGACTTTTCGCCTAATCCGGATCGCCGGAATTCTAACATCTTACCGTCCAGGAGTGCGGTTATTCAAGCTTGCACGATAACTTCAGGTCTAATAGCAGCTTTTGGAATTGTGATCCGGCAGGCGTCTCATGTTGCGTCAGTGGAAGGATTACCAATCTTAGACTGCTCTTCAGAAGTATCATTCAGTTTTGAGATGTGGCATCTTGAGTTGATTATAGGGCTTGTAGTATTGATTTCATCATGTCGCTATTTGCTATTGAAGACATGGACAGATTTTGCTGAGTCTAGCGAAGCAGCCAATCAGCAGGTCCTCAGCTCTCTCCAGCCTTTGGATTACATGGTTGTTGCATTCTTACCTGGGATTAGCGAGGAACTACTTTTCCGTGGTGCGATTATGCCACTTTTTGGAATGAATTGGAATAGTGTTGGGTTGGCTGCCTTGATCTTTGGTGTTTTGCACCTAGGCAATGGTCGAAAGTATTCCTTTGCCATCTGTGAACAACCTCATTGGAGGGCTACTATGGCGGTACACATCGAACGCACAGAAATGAGACGAGGAATTGCCATCTTCACACACATGCATGCATCAGAGACCAACAACCCAATCGAGTATGAACAACAAGGAGGTAAGCCACTACCCAAGTTCGGGGAATGGGACGTGAATGACCCTGCATCAGCGGAAGGATTCACAGTTATATTCAACAAGGCCAGAGATGAGAAGAAAACCGGTGGAGGAGGATCTGGGCGAGTTTCATCGCAGCGAAAATATGGTTCTACACGCAAGGATGATGACGATAAACCCCCCAAGCTAGCTCCGATCCACACACAAAACAACACAATACACAGAAAGATGCAACAAGACATCGTCGCATGCTGCAACAGCACTGGCCCAACACCAGTGATTTTCATCATCATCTCATGCCTCGGATTAATCGTCACACTCAAACACTTGTTCTCCATCTCAAAATGGATCTTCAAAACATGCTTCACATCCGACACGGACCTAATCAAGACCTACGGCTCATGGGCCATGGTCACCGGAGCCACTGACGGCATCGGGAAAGCCTTCGCCCACCAGCTAGCACGGAGAGGCCTCAACCTCGTACTCGTCAGCAGGAGCGCCAAGAGGCTCGAAACCGTCGCAAGTGAGATCAGAGAGAAAAATCCTGGTACGAAGGTGGAGGTCATCCAGGTGGACTTTTCCGGGGACATATCGGGGGGTATCCGGCGAATGGAGGCGGCGGCGCGTGAGTTGGATCTGGGCGTGCTGGTTAACAACGTGGGGGTGACGTACCCGGGGGCGTTGTTCTTTGAGGAGTTGGAGGAGAGGGTGTGGAGGAACATAGTGAAGGTGAACGTGGAAGGCACAACAAGGGTGACCAAAGCTGTGTTGCCTGGGATGATCAAGAGGCGGAAAGGTGCAATCGTCAACATTGGCTCTGGCGCTGCCGTCGTTGTCCCTTCGCATCCTCTCTACACTGTCTATTCTGCTACTAAGGCTTACGTGGATCAGTTATCAAGATCTCTGCACGTGGAGTATAAGCAATATGGCATTCACGTTCAGTGTCAGGTACCGCTGTACGTTGCAACGAAGATGGTTTCGGAGGTGGCATCGATAAAGAGAGAGTCGCTGTTCATTCCAACGGCAGAGGGATATGCGAGAGCTGGGATACGTGAAATTGGAGGAGCAGCAAGGTGCACGCCTTATTGGGCTCACTTTATTCAGTGGTCCTTCGCATCCTTGCTCCCTCACGCTTTACTCGATGCTTGGCGCTTCTCCATCGGTTTGCGCCGCCGCAACCATGAGAAGAGCCAGAACCCGCCCCCAAAATCATCCATCCCCACCCAACTATTAGGCTAG 2040 0.4926 MYHREERANQNRKEKPSLSSAGKRYSICSFAKKSLKKSKRNVPETSEDLSEDKFVQNDMLDFSPNPDRRNSNILPSRSAVIQACTITSGLIAAFGIVIRQASHVASVEGLPILDCSSEVSFSFEMWHLELIIGLVVLISSCRYLLLKTWTDFAESSEAANQQVLSSLQPLDYMVVAFLPGISEELLFRGAIMPLFGMNWNSVGLAALIFGVLHLGNGRKYSFAICEQPHWRATMAVHIERTEMRRGIAIFTHMHASETNNPIEYEQQGGKPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGGGSGRVSSQRKYGSTRKDDDDKPPKLAPIHTQNNTIHRKMQQDIVACCNSTGPTPVIFIIISCLGLIVTLKHLFSISKWIFKTCFTSDTDLIKTYGSWAMVTGATDGIGKAFAHQLARRGLNLVLVSRSAKRLETVASEIREKNPGTKVEVIQVDFSGDISGGIRRMEAAARELDLGVLVNNVGVTYPGALFFEELEERVWRNIVKVNVEGTTRVTKAVLPGMIKRRKGAIVNIGSGAAVVVPSHPLYTVYSATKAYVDQLSRSLHVEYKQYGIHVQCQVPLYVATKMVSEVASIKRESLFIPTAEGYARAGIREIGGAARCTPYWAHFIQWSFASLLPHALLDAWRFSIGLRRRNHEKSQNPPPKSSIPTQLLG* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2744 679 MobiDBLite consensus disorder prediction 660 679 - -
Aev03g2744 679 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 362 662 - -
Aev03g2744 679 MobiDBLite consensus disorder prediction 315 330 - -
Aev03g2744 679 Gene3D - 394 625 - -
Aev03g2744 679 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 533 541 IPR002347 -
Aev03g2744 679 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 478 489 IPR002347 -
Aev03g2744 679 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 555 574 IPR002347 -
Aev03g2744 679 PANTHER RH59310P 362 662 - -
Aev03g2744 679 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 399 655 IPR036291 -
Aev03g2744 679 MobiDBLite consensus disorder prediction 299 338 - -
Aev03g2744 679 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 268 302 IPR008700 -
Aev03g2744 679 MobiDBLite consensus disorder prediction 1 19 - -
Aev03g2744 679 Pfam Type II CAAX prenyl endopeptidase Rce1-like 171 219 IPR003675 GO:0004222|GO:0016020|GO:0071586
Aev03g2744 679 MobiDBLite consensus disorder prediction 1 22 - -
Aev03g2744 679 Pfam short chain dehydrogenase 402 596 IPR002347 -
Aev03g2744 679 CDD 17beta-HSD1_like_SDR_c 400 643 - -
Aev03g2744 679 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 542 570 IPR020904 GO:0016491
Aev03g2744 679 PRINTS Glucose/ribitol dehydrogenase family signature 555 574 IPR002347 -
Aev03g2744 679 PRINTS Glucose/ribitol dehydrogenase family signature 576 593 IPR002347 -
Aev03g2744 679 PRINTS Glucose/ribitol dehydrogenase family signature 478 489 IPR002347 -
Aev03g2744 679 PRINTS Glucose/ribitol dehydrogenase family signature 402 419 IPR002347 -
Aev03g2744 679 PRINTS Glucose/ribitol dehydrogenase family signature 527 543 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2744 Aev-Chr3 27362092 27374907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2744 350 660 Lipid Metabolism Gene Families AT1G24470 53.846 8.85e-117 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2744 K10251 - qsu:112015935 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2744 03 27362092 27374907 Aev03g2744 03 27362092 27374907 ECH