Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2480 ATGGCTATTACTTCTACTCCTTCATACTTCCCTCTTCGTTGGGAGAGTACAGGGGACCAATGGTGGTATGCCTCACCAATTGATTTGGCTGCTGCAAATGGACTCTATGATCTTGTCACTGAGCTTCTCCACCTTGACACAAACCTCCTCATCAAACTCACTTCCCTTCGCAGAATTCGCCGCCTTGAAACCGTTTGGGATGATGAGGCTAACTTTGAGGATGTTGCCAAGTGCCGCTCCAAGGTTGCAAGGAACCTTCTCAGTGAGTGTGAGAATGGAAAAGGAAAAGGACAGAACTCTCTCATACGTGCTGGTTATGGTGGATGGCTTCTCTACTCTGCTGCATCAGCTGGGGACTTGGACTTTGTTCATGAGCTTTTGAGGAGAGACCCTTTTCTTGTGTTTGGTGAAGGAGAGTATGGTGTTACTGATATGCTTTATGCTGCTGCTAGGAGCAAGAACTGTGAGGTCTTTAGGCTCTTGCTTGATTCTGCACTCTATGGAGAGGAAGAGTTGGATGGTGGGGTTTTTAAGAGGGAGATGATGAATAGGGCTATTCATGCTGCTGCAAGAGGAGGGAATTGGGAAATGCTGAAGCAGCTCATGGCAAGTGTTTCTGAGATTCTGTCATATACAGATGCTCAAGGCTGTACTGTCTTGCATGCAGCAGCTGGCAGAGGCCAGGTTGAGGTGGTGAGAAATCTGGTTGAATCATCTGATATTGTCAACTCAGTTGATGCTCAAGGCAATACAGCATTACATGTGGCTTCTTACAGGGGCTACTCAACTGTGGTGGAGATTCTGATTCAAGCATCGCCCTCATTAGCATCGCTAACTAATCACTATGGAGATACTTTTCTTCATATGGCGGTGGCCGGTTTCAGAAGCCCCGGTTTCTGCAGGCTAGACAAGCACACAGAGCTCATGAACCAATTGATAAGTGAGAAGATTGTGAAAATGCAGGACATCATCAATGTCAAGAACAGTGATGGAAGAACAGCTCTTCATATAGCTGTGATTCATAATATTCAGTGTGATATAGTTGAATTACTGATGTATGTTCCATCGATCGATTTGAACATCCGTGACGCCGATGGGATGACACCTTTGGATCATCTGAAGCAAAGACCAAAATCAGCATCTTCTGAAATCTTAATCAAGCAGTTGATCTCAGCTGGTGGTATCTCCAATTGTGAAGATTATGTTGCAAGAAATGCACTTGTTACTCATTTGAAAACTCATGGCATTGGAACTAGTCCCGGAACTTCATTTAGAATACCGGATGGAGAGATATTCTTGCACACAGGCATTGATAATTCCTTTGTTTCCAATTATGATCAGGCAAGTGTAGAATCAAATTCATGCTCAGGTGAAATCAGCATTCATGAGTCAGCGAGTTCTCGACATAGCGCCAAGTCTAGTCCTCTCAACTATGCTGCTAGGCGCTTAAAGTTTCTTTTCCAGCGGCATAAGAGAAGAGAGGCAAAAGAAGATGCATCATCAGAGTTTGCAGATGATGATTCTGTGGCTTCTTTCATTTCAAGTAAGAAATTGGAAGAGTCTCCAATTCCATTGAGGCAGAGATACTCAAAACATTGTTCCCTTCCAAACAACAAGAGAACATTTCCTATAAGGAGCTTTGTTCCAAGTCCATCCAGCAAAAAATATTTTGCTGCTGGCCTAATGCAAGGGGTAATTCAGGTCAATAAACAAAAGGGTAGTGGTTTTGATATAATGGGACCCTCTTGCTCCAAATTGCCAATGGCTGATGATGGTTCAGTACTAGAGTTGAACTATAATAATAGGCAAGGATCCTTCAATAAGAAGTTGATGAATAGGTACTTTTCTTTTGGAGCACAAGGCAATGGCTGCACAAGGATAAATCTCAACACCAAGAGCTTTGGTTCTTTAGTTGCATGA 1920 0.4333 MAITSTPSYFPLRWESTGDQWWYASPIDLAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLETVWDDEANFEDVAKCRSKVARNLLSECENGKGKGQNSLIRAGYGGWLLYSAASAGDLDFVHELLRRDPFLVFGEGEYGVTDMLYAAARSKNCEVFRLLLDSALYGEEELDGGVFKREMMNRAIHAAARGGNWEMLKQLMASVSEILSYTDAQGCTVLHAAAGRGQVEVVRNLVESSDIVNSVDAQGNTALHVASYRGYSTVVEILIQASPSLASLTNHYGDTFLHMAVAGFRSPGFCRLDKHTELMNQLISEKIVKMQDIINVKNSDGRTALHIAVIHNIQCDIVELLMYVPSIDLNIRDADGMTPLDHLKQRPKSASSEILIKQLISAGGISNCEDYVARNALVTHLKTHGIGTSPGTSFRIPDGEIFLHTGIDNSFVSNYDQASVESNSCSGEISIHESASSRHSAKSSPLNYAARRLKFLFQRHKRREAKEDASSEFADDDSVASFISSKKLEESPIPLRQRYSKHCSLPNNKRTFPIRSFVPSPSSKKYFAAGLMQGVIQVNKQKGSGFDIMGPSCSKLPMADDGSVLELNYNNRQGSFNKKLMNRYFSFGAQGNGCTRINLNTKSFGSLVA* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2480 639 ProSiteProfiles Ankyrin repeat region circular profile. 248 270 - -
Aev03g2480 639 ProSiteProfiles Ankyrin repeat profile. 215 247 IPR002110 GO:0005515
Aev03g2480 639 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 7 622 - -
Aev03g2480 639 Pfam Ankyrin repeats (3 copies) 186 271 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 181 210 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 248 277 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 282 322 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 106 135 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 215 244 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 330 361 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 140 174 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 365 400 IPR002110 GO:0005515
Aev03g2480 639 SMART ANK_2a 22 51 IPR002110 GO:0005515
Aev03g2480 639 Pfam Ankyrin repeat 330 363 IPR002110 GO:0005515
Aev03g2480 639 ProSiteProfiles Ankyrin repeat profile. 248 280 IPR002110 GO:0005515
Aev03g2480 639 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 7 622 - -
Aev03g2480 639 ProSiteProfiles Ankyrin repeat region circular profile. 215 246 - -
Aev03g2480 639 SUPERFAMILY Ankyrin repeat 110 386 IPR036770 -
Aev03g2480 639 Gene3D - 15 413 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2480 Aev-Chr3 25824801 25827511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2480 110 371 Miscellaneous Gene Families AT1G07710 31.852 6.30e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2480 - - gmx:100791999 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2480 03 25824801 25827511 Aev03g2480 03 25824801 25827511 ECH