Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2474 ATGCGACTGAACTTTGAAAGAGGTGTGCTGCTGCTTCTACACCGAAACCACACAAACAAACACACAGCCGAATTGCGTCGCAGCGTCGTCGTTTTGACCAAAATGGCTCCGAAGCCAAAACCCGCTTCGGCGGCGCCGTCACAATCCGCTCCTCCTCCTCCTCCCCTCGAAGATCTCTTCACCACCCTCAACCGCCACGTCCAAAACTCCTCCTTCGACAACGCCGTCAGAGTCGCAGATCAGATTCTGGCGGTCGCACCCGCCGATGAGGACGCACTCCGATGCAAGGTCGTGGCGCTCATCAAGGCCGATAAGATCGACGCCGCTCTCTCCGCCATTAACTCTTCTCGGACCCCTCCCCCTGATTTCCATTCCATCAAGGCATACTGCTTATACAGACAAAATAAGTTAGATGAAGCTTTGGAGTCTTTGAAAAGACAGGAGAGAAATGAGGAAAGTATGCTTTTGGAAGCTCAGATTTTGTATCGTCTTGTGAAAATGGATACTTGCGTAGATATCTATGGGATGCTCCAAAAATCCAAGATTGATAACTTGGAAATAAATTCTGTTGCCAGCCTAGTTATGGCTGGGAGGTCATCTGAAGTTCAAGGAATGCTGGATTCACTTCGGATTAAAGCAACAAGCAGCTTTGAATTGGCATTCAATACTGCTTGTTCATTAATTGAAAGGAAGAAGTACACAGATGCTGAACAACTCTTGTTGACAGCCCGAAGAATTGGTCAGGAAATGCTTAGGGATGACAATTTTGCTGATGATGAGATAGAACTTGAACTGTCTCCTATAGCAGTACAATTGGCCTATGTCCAGCAGCTTCTTGGACGCAAGCAAGAGGCTATTGAAGCTTACACGGACATAATCAAACAAGATGTGGCTGATGAAACATCAATTGCAGTGGCAGTGAACAATCTTGTTTCACTGAGAGGTCCAAAAGATGTTTCTGATAGCCTAAGGAAACTTGATCGGCTAAAAGAGAAAGATGCACAGAACTTTCAGCTTGCTCGTGGACTGGACTTGAAATTTTCAGCAAAAGAAAAGGAAGCAATATATGCAAATAGGGTCCTTTTACTTCTTCATGCCAACAAAATAGACCAGGCCCGAGAACTTGTTTCTGGATTGCCAGAGATGTTTCCAGAAAGTATGATACCTGTGTTGCTGCAAGCTGCCCTCCTGGTTAGAGAAAACAAAGCTGGAAGGGCTGAAGAGATACTAGCACAGTTTGCTAGTAAGTTCCCCGAGAAGTCCAAGATTCTTTACCTGACCAGGGCTCAGGTGGCTGCTGCTGCTGGCCACCCGCATATTGCAGCTGATTCTCTCACTAAGATATCAGATATCCAACACAAGCCTGCTACTGTTGCTACCCTTGTGTCTCTAAAAGAGCGTGCTGGCGACATTGAGGGTGCCGCTGCCGTGCTTGACTCAGCAATCAAATGGTGGTCTGATGCTATGACTGAGGACAGCAAGCTTAATATTATAATGCAAGAGGCTGCTTCATTCAAGCTCAGGCATGGCAAGGAAGAGGATGCTGCTAGACTCTATGAGGAGCTTGTTAAAAGCCAAGGAGGCACAGAAGCACTGGTTGGGCTAGTAACAACAATGGCACGCATGGATGTTGGAAAGGCAGAGCTATATGAAAAGCAACTGAAGGCCTTACCCGGTTTAAAGGGAATTGATGTTGACAGCTTGGAGCGAAGTTCTGGAGTGAAACAGGTTGATGGTCCTGCTCATGCTGTGGTTGCTGAAACATCGGAGGAAGGAAAGAATAAGACAAAATCTAAGAAAAAGAGAAAGAGAAAGCCAAGGTATCCGAAAGGGTTTGACCCTGCAAACCCGGGTCCTCCCCCGGATCCCGAAAGGTGGCTTCCCAGGCGGGAGAGGTCAAGTTATAGGCCAAAGAGGAAGGACAAAAGAGCTGCTCAAGTGAGAGGCTCTCAGGGTGCTGTAGCTAGAGACAAGCACGATGCTGGTGCCTCTTCCAACAGTTCAAATCCAAAATCAAACCAAGCAGCTTCCTCCAAAGGTGCAACACAAAATGCAGCATCTGAGCAAACCAAGCCTTCATCCAAGTCGAGAAAGAAGTCTAGGAATTAA 2109 0.4704 MRLNFERGVLLLLHRNHTNKHTAELRRSVVVLTKMAPKPKPASAAPSQSAPPPPPLEDLFTTLNRHVQNSSFDNAVRVADQILAVAPADEDALRCKVVALIKADKIDAALSAINSSRTPPPDFHSIKAYCLYRQNKLDEALESLKRQERNEESMLLEAQILYRLVKMDTCVDIYGMLQKSKIDNLEINSVASLVMAGRSSEVQGMLDSLRIKATSSFELAFNTACSLIERKKYTDAEQLLLTARRIGQEMLRDDNFADDEIELELSPIAVQLAYVQQLLGRKQEAIEAYTDIIKQDVADETSIAVAVNNLVSLRGPKDVSDSLRKLDRLKEKDAQNFQLARGLDLKFSAKEKEAIYANRVLLLLHANKIDQARELVSGLPEMFPESMIPVLLQAALLVRENKAGRAEEILAQFASKFPEKSKILYLTRAQVAAAAGHPHIAADSLTKISDIQHKPATVATLVSLKERAGDIEGAAAVLDSAIKWWSDAMTEDSKLNIIMQEAASFKLRHGKEEDAARLYEELVKSQGGTEALVGLVTTMARMDVGKAELYEKQLKALPGLKGIDVDSLERSSGVKQVDGPAHAVVAETSEEGKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVARDKHDAGASSNSSNPKSNQAASSKGATQNAASEQTKPSSKSRKKSRN* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2474 702 PANTHER SIGNAL RECOGNITION PARTICLE 72 50 700 IPR026270 GO:0006614
Aev03g2474 702 SUPERFAMILY TPR-like 270 524 IPR011990 GO:0005515
Aev03g2474 702 PIRSF SRP72 47 702 IPR026270 GO:0006614
Aev03g2474 702 Pfam SRP72 RNA-binding domain 587 637 IPR013699 GO:0006614|GO:0008312|GO:0048500
Aev03g2474 702 Gene3D Tetratricopeptide repeat domain 206 556 IPR011990 GO:0005515
Aev03g2474 702 Pfam Putative TPR-like repeat 92 191 IPR031545 -
Aev03g2474 702 SUPERFAMILY TPR-like 58 296 IPR011990 GO:0005515
Aev03g2474 702 MobiDBLite consensus disorder prediction 661 691 - -
Aev03g2474 702 MobiDBLite consensus disorder prediction 571 702 - -
Aev03g2474 702 Coils Coil 134 157 - -
Aev03g2474 702 MobiDBLite consensus disorder prediction 36 56 - -
Aev03g2474 702 Gene3D Tetratricopeptide repeat domain 56 199 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2474 K03108 - gmx:100810125 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2474 03 25785757 25788884 Aev03g2474 03 25785757 25788884 ECH