Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2246 ATGTCAGCCGCAGTGGCAGCCGCAGCCGCCGCTTCCGCCGCAATCTCCGGCTACCACAACTCCTCCAACACCAACACCAACAACAGAGACCACCGCCATCATCATCATCAGCTGCCATTAACAACAGAACAGGTGCAAGTCTCTGTTCCTCTGAGCAGGTACGAGTCACAAAAGAGGCGTGACTGGAACACGTTCGGGCAGTACCTAAAGAACCACCGTCCACCATTAACACTGTCACGGTGCAGCGGCGCACACGTCCTGGAGTTCCTCCGCTACTTGGACCAGTTCGGGAAGACAAAAGTGCACACAGAAACGTGTGCGTATTTCGGGAACTCTCACCCACCAGGGCCATGCCCATGTCCCCTGAAACAAGCATGGGGCAGCCTCGATGCTCTGATCGGGAGGCTGCGTGCGGCCTTTGAAGAGAACGGAGGGAACCCTGAGATCAACCCTTTCGGTGCACGTGCTGTGAGGCTTTACCTCAGGGAAGTCAGGGACGCGCAGGCTAAGGCAAGAGGTATTGCTTATGAGAAGAAGAAGAGGAAGAAGAATGTTCAGCAGCAGCAGCAAAATGGGTCGACGATGATGGTGGTGGATGATCCTGTTCATGATCTCACTTGTTCTGCTGCGCTGCAATATTCTTCACCATCACCCTTCCATAATACTCATATTGCTGCTGCTGCTGCTGCCGCCTTTGTTCACCTGTCAAATTCAGATAATGGGGCTCCTCCTAGAGATGCTTCTGCAATTTCTTATTTCTCATCCTAA 768 0.5312 MSAAVAAAAAASAAISGYHNSSNTNTNNRDHRHHHHQLPLTTEQVQVSVPLSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHTETCAYFGNSHPPGPCPCPLKQAWGSLDALIGRLRAAFEENGGNPEINPFGARAVRLYLREVRDAQAKARGIAYEKKKRKKNVQQQQQNGSTMMVVDDPVHDLTCSAALQYSSPSPFHNTHIAAAAAAAFVHLSNSDNGAPPRDASAISYFSS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2246 255 ProSiteProfiles ALOG domain profile. 53 180 IPR006936 -
Aev03g2246 255 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE 1 193 - -
Aev03g2246 255 MobiDBLite consensus disorder prediction 18 42 - -
Aev03g2246 255 PANTHER PROTEIN G1-LIKE2 1 193 IPR040222 -
Aev03g2246 255 Pfam ALOG domain 50 166 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2246 Aev-Chr3 24374550 24375317 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2246 - - adu:107481719 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2246 03 24374550 24375317 Aev10g1298 10 16531021 16531638 ECH
Aev03g2246 03 24374550 24375317 Aev03g2246 03 24374550 24375317 ECH
Aev03g2246 03 24374550 24375317 Aev04g0471 04 2948463 2949068 ECH