Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2033 ATGTCTCAGGTGGATAACAGAAATTCTTCAGCTGCTAAGCGTGCTAGGACTGATGGTAGTCGCAGGGAAGATGATTGGACATGCCCCAGCTGTGGCAATGTCAATTTTTCTTTCAGGACAACTTGTAACATGCGTAATTGCACTCAGCCAAGGCCTGCAGATCACAATTCGAAATCTGCTGCCAAGCCTCTACAAGCTCCACAGGGTTATTCTTCCGCTGCCCCATATTTAGGTTCTAATGCTCCTGCTTCAATATATCTTGGTGTCCCACCATACGGGTCCTCTCTATTCAATGGATCATCTATTCCTCCATATGAGGTTCCATTTTCCGGAGGATCGGCTTATCACTACAACTATGGAAGTCGCCTTTCTGCTGGCAGTCCTTATAGGCCACTTCATTTATCGGCACCAGCACCCTACGCAAGTGGATCCATGATTGGAAATGGTGGGATCTATGGTATGCCCCCTCTGTTGGATCGGTATGGCCTGGCTATGCCTATTGGACCTGGAACAATGGGCCCTAGGCCAGGATTTTTTCCTGATGACAAGTCTCAGAAAAAGGGTGCAGATGCAACTCGCGACAATGACTGGACATGTCCAAAATGTGGCAACGTCAACTTTTCATTCAGACCTGTCTGCAACATGAGGAAGTGCAATACACCCAAGCCTGGATCGCAGGCCTCAAAGTCGGACAAAAGTTCTAAGCAAAAGATGCCAGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTATCCATTCAGAACTAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCGGCTGAATCAGAGAAATCTCCTTCACCAGCTCCAGATCAAAATGATCAGATAGGTTCCGTTTACTCTCAGAATCCACTCATTTATTCTAGTCATGATGGTATCATATGCATTTAG 921 0.4593 MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAAKPLQAPQGYSSAAPYLGSNAPASIYLGVPPYGSSLFNGSSIPPYEVPFSGGSAYHYNYGSRLSAGSPYRPLHLSAPAPYASGSMIGNGGIYGMPPLLDRYGLAMPIGPGTMGPRPGFFPDDKSQKKGADATRDNDWTCPKCGNVNFSFRPVCNMRKCNTPKPGSQASKSDKSSKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSPAPDQNDQIGSVYSQNPLIYSSHDGIICI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2033 306 SUPERFAMILY Ran binding protein zinc finger-like 233 270 IPR036443 -
Aev03g2033 306 PANTHER OS08G0521400 PROTEIN 5 282 - -
Aev03g2033 306 MobiDBLite consensus disorder prediction 180 194 - -
Aev03g2033 306 SUPERFAMILY Ran binding protein zinc finger-like 188 225 IPR036443 -
Aev03g2033 306 MobiDBLite consensus disorder prediction 220 242 - -
Aev03g2033 306 Gene3D - 14 54 - -
Aev03g2033 306 Gene3D - 187 225 - -
Aev03g2033 306 Gene3D - 230 271 - -
Aev03g2033 306 PANTHER ZINC FINGER PROTEIN 5 282 - -
Aev03g2033 306 MobiDBLite consensus disorder prediction 11 25 - -
Aev03g2033 306 Pfam Zn-finger in Ran binding protein and others 194 223 IPR001876 -
Aev03g2033 306 Pfam Zn-finger in Ran binding protein and others 239 269 IPR001876 -
Aev03g2033 306 Pfam Zn-finger in Ran binding protein and others 22 44 IPR001876 -
Aev03g2033 306 SUPERFAMILY Ran binding protein zinc finger-like 17 54 IPR036443 -
Aev03g2033 306 MobiDBLite consensus disorder prediction 1 27 - -
Aev03g2033 306 MobiDBLite consensus disorder prediction 264 292 - -
Aev03g2033 306 SMART zf_4 241 267 IPR001876 -
Aev03g2033 306 SMART zf_4 24 50 IPR001876 -
Aev03g2033 306 SMART zf_4 195 221 IPR001876 -
Aev03g2033 306 MobiDBLite consensus disorder prediction 172 195 - -
Aev03g2033 306 MobiDBLite consensus disorder prediction 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2033 Aev-Chr3 23109338 23113931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2033 181 272 EF-hand Containing Proteins AT1G55040 30.435 2.55e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2033 - - pmum:103322078 559.296