Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2021 ATGAGAACAAGGACCGGCCTGTGTTATCCTTCTCATACCTCTTGCCCTTCCAAGAGAAGAAGAAAAGACAGCATGGCGGCGAATCAAGATTCCGCTGTTGTTACCCGCCGCAAAAGGCAGAAGAAGGCATCGTTTCTTCAAGACACAACCGCCGGAAGCCACGGACTCTTCGATTCTTTGCCGGACGAGCTTGTTCTCTCTATACTCTGCAACCTTAGCTCAACAGCTAATTCTCCTTCCGATTTCATCAGTGTTCTCATGACGTGCAAGAGACTAAACACCTTAGGTCTTGACTCTATGGTTCTATCAAGAGCATCCAACAAAACATTCTCAGTCAAAGCGAAAAAGTGGTCTGAATCCTCCCACCGGTTCCTCAAACAGTGCTCTGATGCCGGAAACATCGAAGCATGCTACACTCTCGGCATGATTCGGTTCTACTGTTTGGAGAATCGTGAGAGTGGCCGTTCACTGATTTCGAAGGCGGCGATGAAATCTCACGCGCCGGCACTGTACTCGCTGGCGATAATACAGTTCAACGGAAGCGGAGGCTCCAAAGATAACAAGGACCTAAGAGCAGGCGTCGCGTTATGCGCACGCGCCGCGTTCCTCGGTCACATCGACGCGCTCCGCGAGCTTGGTCATTGCTTGCAAGACGGTTACGGCGTGAAACAGAATGTCGTTGAAGGAAGACGGTTCCTTGTACAGGCCAACGCGCGTGAACTCGCATCCGTTTGGCAAAACAACAACTCAGTCACATGGAGCGTGATGCCAAATCCAGGCCCGAGTCAAAGCCCAAGCCCAATCCAAGGCCCGGGCCAGACGCCGAGGCTGTCGTTCCTTGCGGCGTGCCCGCTGTTGAGCGACTACGGCTGCAATGTTCCGCCGCGGGAGGCCCATCCGGCGAATAGGTTTATGATGGAGTGGTTTTCGGGGGGAGTTGGGCCCGGGCTTAATAGGAGGCTTTGCTCGCACGCGGGCTGTGGGAGGCCCGAGACGAGGAAGAGAGAGTTTAGAAGGTGTTCGGTTTGTGGCGCGGCGAATTACTGCTCACGCGCGTGTCAGGCGCTTGATTGGAAGAGTAGGCATAAGGTGGAGTGTACTCCGGTTGAGAGGTGGGTTGATGAGGATGACGGTGAGGCTAACGGCGGCGATATCGGCGGAGACGGCGAGGTGGTGGTGGTTGCTGCTGCTGATAGCTAG 1200 0.5467 MRTRTGLCYPSHTSCPSKRRRKDSMAANQDSAVVTRRKRQKKASFLQDTTAGSHGLFDSLPDELVLSILCNLSSTANSPSDFISVLMTCKRLNTLGLDSMVLSRASNKTFSVKAKKWSESSHRFLKQCSDAGNIEACYTLGMIRFYCLENRESGRSLISKAAMKSHAPALYSLAIIQFNGSGGSKDNKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVKQNVVEGRRFLVQANARELASVWQNNNSVTWSVMPNPGPSQSPSPIQGPGQTPRLSFLAACPLLSDYGCNVPPREAHPANRFMMEWFSGGVGPGLNRRLCSHAGCGRPETRKREFRRCSVCGAANYCSRACQALDWKSRHKVECTPVERWVDEDDGEANGGDIGGDGEVVVVAAADS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2021 399 SUPERFAMILY F-box domain 52 113 IPR036047 GO:0005515
Aev03g2021 399 Gene3D Tetratricopeptide repeat domain 110 253 IPR011990 GO:0005515
Aev03g2021 399 SUPERFAMILY HIT/MYND zinc finger-like 321 371 - -
Aev03g2021 399 PANTHER F-BOX DOMAIN, ZINC FINGER, MYND-TYPE, TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN PROTEIN-RELATED 1 390 - -
Aev03g2021 399 ProSiteProfiles Zinc finger MYND-type profile. 324 366 IPR002893 -
Aev03g2021 399 SUPERFAMILY HCP-like 119 236 - -
Aev03g2021 399 PANTHER MYND DOMAIN-CONTAINING 1 390 IPR044508 -
Aev03g2021 399 MobiDBLite consensus disorder prediction 1 34 - -
Aev03g2021 399 Pfam MYND finger 326 366 IPR002893 -
Aev03g2021 399 Gene3D - 317 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2021 Aev-Chr3 22986005 22987495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2021 - - adu:107468872 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2021 03 22986005 22987495 Aev03g2505 03 25983752 25985143 PCT