Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev03g2009 | ATGGATTGGCAAGGGCAAAAGCTGGCAGAGCAGCTAATGCAGATAATGCTGCTTGCATTTGCTGCAATTGCATTTGTGACTGGATATTATATGGCTTCTTTCCAAATGATGATCCTCGTATATGCCGGAGGTGTGGTTCTTACCACATTGGTGACTGTCCCTAATTGGCCTTTCTTCAACTGCCACCCTCTAAAGTGGTTGGATCCGAGTGAGGTCGAAAAGCATCCGAAGCCACAACCGTCCGTGGATGTTAAGTCAAAGAAGAAACCTGCCAAGAAGTAG | 282 | 0.4645 | MDWQGQKLAEQLMQIMLLAFAAIAFVTGYYMASFQMMILVYAGGVVLTTLVTVPNWPFFNCHPLKWLDPSEVEKHPKPQPSVDVKSKKKPAKK* | 94 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev03g2009 | 93 | MobiDBLite | consensus disorder prediction | 70 | 86 | - | - | |
| Aev03g2009 | 93 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT | 1 | 93 | IPR009542 | GO:0005787|GO:0006465|GO:0016021 | |
| Aev03g2009 | 93 | Pfam | Microsomal signal peptidase 12 kDa subunit (SPC12) | 1 | 70 | IPR009542 | GO:0005787|GO:0006465|GO:0016021 | |
| Aev03g2009 | 93 | MobiDBLite | consensus disorder prediction | 70 | 93 | - | - | |
| Aev03g2009 | 93 | PANTHER | SIGNAL PEPTIDASE COMPLEX SUBUNIT 1-RELATED | 1 | 93 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev03g2009 | Aev-Chr3 | 22893852 | 22894133 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev03g2009 | K12946 | - | gmx:100777545 | 135.576 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aev03g2009 | 03 | 22893852 | 22894133 | Aev03g2009 | 03 | 22893852 | 22894133 | ECH | |
| Aev03g2009 | 03 | 22893852 | 22894133 | Aev03g2496 | 03 | 25931948 | 25932229 | PCT |