Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2008 ATGTCGCTGGCATCCTTCTCCATCCTCCGCCACACTCACCACCGCGCGGCGGCCTCCGCCTCCGCCGCCGCCGCACCTCTACTCCGTCGCTGCTTCCGGTGTCTCCCAGTCTCCGCCGCCGCCGCAAGGCACCACCAAAACCCTAACCGGCAACACCAACAACAAGCCCCAAGCAAGAACCTCCTGAAAGCGAAGCAAACCATGAAGGAATTCTCGTCGCTGGCGCCAGTGCTCTCCCTCGAGACCCCTCCTCCCCTTTCCGACACCCAGGCCGTCGGAATCGTCGCCGCCTCCCAGGCCAACTTCATGCGCGTCATCGTCCACTCCCTCCCTCCTTCTAGAAGCTTCCACGACGACGATGAGAAGCTTCCAGAACCTTCTACCTCTTCTTCTTCTTCTGGTTCCGCTGGTGTTGAGCTCCTCTGTGTTGTGAGGGCGCTGCTGAAGAAGATAAAGAGGAGGGTTATGGTTGGAGACAAGGTTCTAGTAGGTTCCATTGATTGGGTTGATCGAAGGGGAATGATCGAGAACGTGTTCCAGAGGGATTCAGAGATTCTTGACCCTCCCGTTGCGAATGTGGATCACTTGCTTGTGCTTTTCTCGCTCGATCAACCGAAGGTGGAGCCCTTTTTGCTCACCAGGTTTCTCGTTGAAGCTGAATCCACTGGGATCCCTCTCACTCTTGCGCTCAATAAGATGGAGCTTGTCGACGGAGAGGCCATAAGTTCGTGGAAGGCTAGGCTGCGCAGCTGGGGCTATGAGCCGATTATCTGCAGCGTGGAGTCCGGACATGGACTTGATCTACTTGCATTCAAATTGAGAGATCAGACAAGCGTGACTGTGGGCCCTAGTGGAGTTGGGAAATCTAGTTTGATCAATGCCCTTAGAAGCAATCCTCGTACTTGTGATACTGAAGAAGGGGAGAATTGGTTCGAACCGATTTTAGGTAGCAAGTGGTTTGAGAATCAACGAGTTGGGGAGGTCTCAACAAGAAGCGGCCGAGGGAAGCATACTACTCGCCATGTCAGCCTTCTACCATTATCTGGAGGGGGATATCTTGCTGATACGCCTGGATTTAACCAGCCTAGTTTGTTGAAAGTGACAAAGCAATCTCTTGCGCAAACTTTTCCTGAAATCAGGAAAATGCTTAGTGCCGATGCGTCTGCAAAATGTGCATTCAACGATTGTTTACATCTGGGTGAACCTGGGTGTGTTGTGAAAGGGGATTGGGAAAGATATTCATTCTATTTTCAACTACTTGATGAAATTAGAATCAGAGAAGAGTTCCAGTTGAGGACATTTGGAACTAAAAGAGAAGGTGATGTAAGGTTCAAAATGGGGGATATGGGTGTTCAGCAAGCAGAACCACGGTTGGAACCTAAGAAGCATCGGCGACAATCTCGGAAGAGGATTAACCAGTCACTTTTGGACGAATTGGATGATGACGATGACGATAACACTATTGATGAGGAGAATGATCCCATGTTAAGGGCATTGAGGAATGAGAACTCTTAA 1515 0.5076 MSLASFSILRHTHHRAAASASAAAAPLLRRCFRCLPVSAAAARHHQNPNRQHQQQAPSKNLLKAKQTMKEFSSLAPVLSLETPPPLSDTQAVGIVAASQANFMRVIVHSLPPSRSFHDDDEKLPEPSTSSSSSGSAGVELLCVVRALLKKIKRRVMVGDKVLVGSIDWVDRRGMIENVFQRDSEILDPPVANVDHLLVLFSLDQPKVEPFLLTRFLVEAESTGIPLTLALNKMELVDGEAISSWKARLRSWGYEPIICSVESGHGLDLLAFKLRDQTSVTVGPSGVGKSSLINALRSNPRTCDTEEGENWFEPILGSKWFENQRVGEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSADASAKCAFNDCLHLGEPGCVVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKREGDVRFKMGDMGVQQAEPRLEPKKHRRQSRKRINQSLLDELDDDDDDNTIDEENDPMLRALRNENS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2008 504 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 81 486 - -
Aev03g2008 504 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 155 298 IPR004881 GO:0003924|GO:0005525
Aev03g2008 504 MobiDBLite consensus disorder prediction 115 135 - -
Aev03g2008 504 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 81 486 IPR004881 GO:0003924|GO:0005525
Aev03g2008 504 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 183 362 IPR030378 GO:0005525
Aev03g2008 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 423 IPR027417 -
Aev03g2008 504 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 91 427 IPR004881 GO:0003924|GO:0005525
Aev03g2008 504 Pfam RsgA GTPase 178 364 IPR010914 GO:0003924|GO:0005525
Aev03g2008 504 MobiDBLite consensus disorder prediction 447 504 - -
Aev03g2008 504 Gene3D - 177 364 IPR027417 -
Aev03g2008 504 CDD YjeQ_EngC 191 421 IPR004881 GO:0003924|GO:0005525
Aev03g2008 504 ProSiteProfiles EngC GTPase domain profile. 191 360 IPR010914 GO:0003924|GO:0005525
Aev03g2008 504 SUPERFAMILY Nucleic acid-binding proteins 92 181 IPR012340 -
Aev03g2008 504 Gene3D Probable gtpase engc; domain 3 366 428 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2008 K06949 - gmx:100796145 731.865