Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2002 ATGCATGTTAAGTCGTATTCGATAAGATTTCCTGCTTTAACTGTTTTTGTTTTGCATTGTTCTTACACTATCGTTGTTTCAAATCTTCCTCCTTTGTTTCCTGATTGCCAGGAACTGATGGGGAAGAAAGTCAGAAAGAAGAGCCAGAGTTCTGTGAAGGATAAAGGGACTGCTAGTCAGTCCCCCCAAAAGGCTGTGGAACCTAGCAACCTGACTGTCGAGTCTCTTGAAGAGGGGGTTTCGGTTGCAAAGGAGACAAATTCTTGCCCTCATATTGTAAAAGGTGTTAATTTAAATAAATTGTCCAGTAAGGTTGGATCTTCTGGATCGATAAGGTGTGAAGATTGTAGGGAAGGTGCAGCTGATAGGAGAGGGGGTAAAGGAAAGGGTAAACATGGGAAGAAGAAAAGTGGTGCGTCATTAGATTCAAAATCCAATTCAAAGGCTATATGGGTTTGTTTGGAGTGTGGTCAATATACTTGTGGAGGTGTGGGGTTACCGATAACCCCTCATTGCCATGTGGTCAGGCATATGAGGCAAACCCGACACCCCTTGGTGGTTAATTTTGAAAAACCTCAGCTGTGTTGGTGTTTTCCTTGCAATATGCTCATTCAAGTTGATAAAATAGAGGAGACTGAAGAAACAGGTAAGCTTCTGTCTGGTGTAGTCAAATTGTTGAATGGACGATCATCGGAAAAATCATCAGTAAACGTTGAAGATGTTGGCTTAGCTGATGGCAGTGTTACTTCAGAAGTTAAATTGGGTACTCTTTCCAGAATTGATTCATATGGACATGGCGGTTATGTAGTTAGAGGCATGGTTAATCTTGGGAATACTTGCTTCTTCAATTCAATCATGCAAAATCTGCTAGGGATGAGCAGATTGCGGGACAACTTTCTGAATTTAGATGCTCCTGTTGGGCCACTGATTTGTTCCTTGAAGAAACTGTTTAGTGAAACAAACCCAGAATCAGGATTGAAAAATGTTATAAATCCCAGGTCCTTTTTTGGTAGTGTATGTTCCAAGTCTCCCCAATTTCGAGGATATCAACAGCATGATAGTCATGAATTGCTCCGTTGCTTGCTGGATGGGTTGAGTACTGAAGAGCTAGCTGCAAGGAAACACAATGGTTCTGCCAAGATAGATGGGACCTCTTCCAATACTTTAGTTGATGATTTATTTGGGGGTCAGATATCTAGTACTGTATGTTGCATTGAATGTGGACATTTCTCAACAGTATATGAGCCTTTTTTGGATCTTTCCTTGCCAGTTCCAACTAAGAAACCTCCACCTCGGAAAGCCCAACAAGTGACTCGAACCAAAAAAGCAAAACTTCCACCAAAAAGAGGTGGAAAGACTCGAGTCAAAGTTAACAGAGATGATGCATTAGCCGCAAAAAGTGAATCAAGCCATGAATCATCCTGCCCTGCTCAGCCCAATGTATCAGTTGCTGGAGACATGGCAGCTCCTTCTGGTGACTCTACAGTATTAGGTTCTGAAGAAATAAGCAATGTCACTGATAAAGAGGACTCATCTTCACCTAATTTGGTTACTGTTGGAGAGTCTCAACATATGCCAGTGCTTGACAATGATGCTAGGAAAATATCAGCTTCATCAGATGATTTTGCGTGGTTGGATTATGTGGAAGCAGGACCTGTGACAGATGAATGTGATTCTCTTTCCCAGAAGGAGGACGCCCCAGAGGTACAAGATACTGAGAGCAAGGATGAATGTTTAACTGAATTGCCTGTACAACGTAGCTGTGAATCTAATGGTCCAGTTTTTTTCCCTAAGGAGGATCAAAATCCAAGACCAGAATCTTCTTCAATGAGTGCATGGGAAGATGAGGTTCCATTACAAGTTCAAGGTTCCGAAGTGCTGTTACTTCCTTACAAAGAAGAAAGCACCTCTGCTGGTGAGATCATTGGAAGAGATGGTGAGGCCTCCTCATCAAATTTGGGCGGTGCTCAAGAAGTGGATTTTGATGGCATTGGTGACTTATTCAATGAGCCTGAACCTGAAGTTGTTGCTGGTCCTGCTCCTAGACCTTCATCTAGTGAGGTCATGGAAGCTGGTTTTATAGATGGTAATAACAGTGAGTCTGAACCAGATGAAGTAGATGATTCAGATTCTCCTGTCTCTGTAGACAGTTGCTTGGCACATTTTATAAAACCTGAGCTTCTCTCTGATGAAAATGCTTGGAACTGTGAGAACTGTTCAAAAATTGTCCGACGTCAAAAGATAGAAGCTAAAAAGAAGGCAAAATCTGTAATGGATGGAATTGATACTGGATTCCATGATGGACAACAGAATGCAGATGACTCTTCTTCTGTTAAAGTTAGAAGCCTTGGTAATGGGGATTTTACAAATGACAATATTTTAGAAAGTTCAGTTTCGCATGTTAAACATGAAACAGAGCTTGAAAATGGTCAAACAAATGACTTGAATTCAATTGTTAACGAAAAGGGTCATGGTACATCTAAGATGAAAAATATGCACAATGAAAAAAGTTGCAATCATTCCGCTGCTGTTTCTTGTATTTCTCTGGAGAAGACTGAAAATATCCAAAGAGATCCTCAGGTGTTTGGTAGTGATAACAATGACTCAGAAGAATGTAGTGAAGAAGAGGCTGACTCCAAAACTTTGAAAGTGAAGAGGGATGCAACTAAGAGGGTTCTCATTCATAAAGCCCCGCCTGTCTTGACAATTCATCTGAAGAGATTCAGCCAAGATGCCCGTGGTCGCTTAAGCAAGTTAAATGGTCATGTCAACTTCAGAGAAACAATGGATCTCAGACCATATATGGATCCCAGATGCATAGTTGAAGAGAAGTATGAATACCACTTGGTTGGTGTAGTGGAGCACTCGGGAACTATGAGAGGAGGTCACTATGTCGCATATGTGAGAGGCGGCCATAGGAACAAAGGGAAAGCTGATAAAGAGAATGAGTGTTCCACATGGTATCATGCCAGTGATGCATATGTGCGTGAAGTTTCTCTTGATGAAGTTCTTCGCTGCGAGGCATATATTTTATTCTATGAAAAAATTTGA 3051 0.4133 MHVKSYSIRFPALTVFVLHCSYTIVVSNLPPLFPDCQELMGKKVRKKSQSSVKDKGTASQSPQKAVEPSNLTVESLEEGVSVAKETNSCPHIVKGVNLNKLSSKVGSSGSIRCEDCREGAADRRGGKGKGKHGKKKSGASLDSKSNSKAIWVCLECGQYTCGGVGLPITPHCHVVRHMRQTRHPLVVNFEKPQLCWCFPCNMLIQVDKIEETEETGKLLSGVVKLLNGRSSEKSSVNVEDVGLADGSVTSEVKLGTLSRIDSYGHGGYVVRGMVNLGNTCFFNSIMQNLLGMSRLRDNFLNLDAPVGPLICSLKKLFSETNPESGLKNVINPRSFFGSVCSKSPQFRGYQQHDSHELLRCLLDGLSTEELAARKHNGSAKIDGTSSNTLVDDLFGGQISSTVCCIECGHFSTVYEPFLDLSLPVPTKKPPPRKAQQVTRTKKAKLPPKRGGKTRVKVNRDDALAAKSESSHESSCPAQPNVSVAGDMAAPSGDSTVLGSEEISNVTDKEDSSSPNLVTVGESQHMPVLDNDARKISASSDDFAWLDYVEAGPVTDECDSLSQKEDAPEVQDTESKDECLTELPVQRSCESNGPVFFPKEDQNPRPESSSMSAWEDEVPLQVQGSEVLLLPYKEESTSAGEIIGRDGEASSSNLGGAQEVDFDGIGDLFNEPEPEVVAGPAPRPSSSEVMEAGFIDGNNSESEPDEVDDSDSPVSVDSCLAHFIKPELLSDENAWNCENCSKIVRRQKIEAKKKAKSVMDGIDTGFHDGQQNADDSSSVKVRSLGNGDFTNDNILESSVSHVKHETELENGQTNDLNSIVNEKGHGTSKMKNMHNEKSCNHSAAVSCISLEKTENIQRDPQVFGSDNNDSEECSEEEADSKTLKVKRDATKRVLIHKAPPVLTIHLKRFSQDARGRLSKLNGHVNFRETMDLRPYMDPRCIVEEKYEYHLVGVVEHSGTMRGGHYVAYVRGGHRNKGKADKENECSTWYHASDAYVREVSLDEVLRCEAYILFYEKI* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2002 1016 CDD Peptidase_C19K 888 1014 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 53 72 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 857 881 - -
Aev03g2002 1016 SUPERFAMILY Cysteine proteinases 270 1015 IPR038765 -
Aev03g2002 1016 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1 42 1015 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 120 142 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 558 582 - -
Aev03g2002 1016 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 271 1016 IPR028889 -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 453 467 - -
Aev03g2002 1016 Pfam Zn-finger in ubiquitin-hydrolases and other protein 113 206 IPR001607 GO:0008270
Aev03g2002 1016 MobiDBLite consensus disorder prediction 496 520 - -
Aev03g2002 1016 SUPERFAMILY RING/U-box 88 205 - -
Aev03g2002 1016 Gene3D Cysteine proteinases 696 756 - -
Aev03g2002 1016 Gene3D Cysteine proteinases 757 1016 - -
Aev03g2002 1016 Gene3D Cysteine proteinases 263 463 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 44 72 - -
Aev03g2002 1016 ProSiteProfiles Zinc finger UBP-type profile. 87 223 IPR001607 GO:0008270
Aev03g2002 1016 MobiDBLite consensus disorder prediction 423 524 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 693 712 - -
Aev03g2002 1016 MobiDBLite consensus disorder prediction 556 616 - -
Aev03g2002 1016 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 222 IPR013083 -
Aev03g2002 1016 Pfam Ubiquitin carboxyl-terminal hydrolase 272 1013 IPR001394 GO:0004843|GO:0016579
Aev03g2002 1016 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 947 964 IPR018200 GO:0004843|GO:0006511
Aev03g2002 1016 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 272 287 IPR018200 GO:0004843|GO:0006511
Aev03g2002 1016 MobiDBLite consensus disorder prediction 434 452 - -
Aev03g2002 1016 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 42 1015 - -
Aev03g2002 1016 SMART Zf_UBP_1 141 194 IPR001607 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2002 Aev-Chr3 22756645 22760185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2002 888 1016 Miscellaneous Gene Families AT4G31670 34.848 1.83e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2002 K11844 - gmx:100780952 1384.39