Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1667 ATGCTTGAAATTAGAACAAACATGGAGAATGTGCTAACTCACACTCACACCCACGATGTACATTTCCACCCCAATTGCAGAAACACTATACACAAAGAACACAAGAGCAGCAGCAACAACTTCTTCTTCCTCAAACCCAATTTCGCCAAATTCCAAACCCTCACCACCCAAATTCGCAGTTCCAGACCGACTGGTGCAGTTCCAGACTCAAAGCACACAACCCTTCTCGTTGAAACCTACCATGTCCATCGGGGCCTCAGAATATTATTTGCGAAGCTCGAGAAGGAAGATTCAGACCCTCTTCGGATACTCGCTGAAGACGGTGATTGGCCCAGAGAGTACTTCTGGGCTGTTGTCAAGTTCCTCAAAAATGCCTCTAGGTTCTCAGAAATCGTTCAGGTGTTTGATATGTGGAAGAACATTGAGATATCACGGGTTAATGAGTTAAACTATAACAAGATCATCTCCTTGTTAGGTGGAGAAGGGATGATGGAAGGTGCCGTGTCTGCATTGCAGGAGATGAAAGCTTATGGTCTCAAGCCTTCGTTGGAGACCTACAATCCAATCATTCATGGTTTCTCCAGAGACGGTAAAATCGACAAGGCTTTGAATTTTCTTGATGAGATGAAAGAATTTGGTTTGGTGCCAGATACTGAGACTTATGACGGTTTAATTCGAGCTTACGGGAAATTTAAGATGTACGATGAGATCGGTAAGTGTGTGAAAAAGATGGAGTTGGATGGATGCCCTCCTGATCAAATTACTTATAATATACTTATACAAGAGTATTCACGCGGCGGCGTAATCCAGCGGATGGAAAAATTGTATCATAGAATGAATTCGAAAAGAATGCGTTTGCAGTCTTCTACTTTGGTTGCAATGCTTGAGGCTTATGCCACATTTGGTATGGTTGAAAAGATGGAAACATTCTATAGAAAGCTGTTCAACTCAAAAACGCGTCTAGATGATGATTTGATAAGAAAATTGGCTGAAGTTTATCTCAAGAACTACATGTATTCTAGATTAGAGGACCTCGGACTAGAACTGCATTCTGCATTTGGCTGGTCTGACCTTGTATGGTGTCTCCGCCTCCTTTCTTATGCATGTGTTTTGAGCCGAAAAGGTATCGATATAATCGTTCAAGAAATGCAACATGCCAATGCTGATTGGAATGTTACTATTGCAAATATTATCATGCTGGCTTATGTGAAGATGAAGGACTTCAGGAACTTGAGGATTTTGCTCTCGCAATTACCGATCCATAAGGTGAAGCCGGATATAATCACCATTGGAATCGTATTCGATGCGAATAGAATCGGCTTTGATGGTAGTGGAGCTTTAGAAACATGGAGGAGAATGGGGTATCTTTACAGAGCTGTAGAAATGGAAACAGATCCTCTGGTCCTTACTGCATTCGGAAAAGGCCATTTTCTTAAATGCTGTGAAGAAGCATACTCTTCCCTTCACTCTGAGGATAGAGAAAGGAAAACATGGACTTATTATAACCTCATAGCTTTAGTGTCAAAACAGTGGTAG 1536 0.4173 MLEIRTNMENVLTHTHTHDVHFHPNCRNTIHKEHKSSSNNFFFLKPNFAKFQTLTTQIRSSRPTGAVPDSKHTTLLVETYHVHRGLRILFAKLEKEDSDPLRILAEDGDWPREYFWAVVKFLKNASRFSEIVQVFDMWKNIEISRVNELNYNKIISLLGGEGMMEGAVSALQEMKAYGLKPSLETYNPIIHGFSRDGKIDKALNFLDEMKEFGLVPDTETYDGLIRAYGKFKMYDEIGKCVKKMELDGCPPDQITYNILIQEYSRGGVIQRMEKLYHRMNSKRMRLQSSTLVAMLEAYATFGMVEKMETFYRKLFNSKTRLDDDLIRKLAEVYLKNYMYSRLEDLGLELHSAFGWSDLVWCLRLLSYACVLSRKGIDIIVQEMQHANADWNVTIANIIMLAYVKMKDFRNLRILLSQLPIHKVKPDIITIGIVFDANRIGFDGSGALETWRRMGYLYRAVEMETDPLVLTAFGKGHFLKCCEEAYSSLHSEDRERKTWTYYNLIALVSKQW* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1667 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 147 181 IPR002885 -
Aev03g1667 511 TIGRFAM PPR: pentatricopeptide repeat domain 185 218 IPR002885 -
Aev03g1667 511 TIGRFAM PPR: pentatricopeptide repeat domain 151 182 IPR002885 -
Aev03g1667 511 TIGRFAM PPR: pentatricopeptide repeat domain 254 283 IPR002885 -
Aev03g1667 511 TIGRFAM PPR: pentatricopeptide repeat domain 220 252 IPR002885 -
Aev03g1667 511 Gene3D Tetratricopeptide repeat domain 233 342 IPR011990 GO:0005515
Aev03g1667 511 Gene3D Tetratricopeptide repeat domain 110 232 IPR011990 GO:0005515
Aev03g1667 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 217 251 IPR002885 -
Aev03g1667 511 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 21 509 - -
Aev03g1667 511 Pfam PPR repeat family 182 229 IPR002885 -
Aev03g1667 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 182 216 IPR002885 -
Aev03g1667 511 Pfam PPR repeat 151 179 IPR002885 -
Aev03g1667 511 Pfam PPR repeat 254 282 IPR002885 -
Aev03g1667 511 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 252 286 IPR002885 -
Aev03g1667 511 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL 21 509 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1667 146 429 Miscellaneous Gene Families AT4G11690 24.834 6.82e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1667 - - ahf:112795661 780.015