Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1573 ATGTGCGTAGTTCCATTCTCCATCACTTGTTCATCCCTCCCACGTTTGCCTCTTTCTTCACCTTCAACCTACTCCCTCCCATTTCCTTCTTCCTCCAAAACCGCCACCACCCCCACCACCACCGCCACATTTTCCAAATCAGCAACCGCCAAAGATGTATGGACCAACAACGACAACATCAAACGACGTCGTACGCTCAGCAGAACTCAACAACAAGAACAGCAACAACGAAACCACCGACACACATACTTGGACCACAGCGTTGACATGGACGAACTCTTAACCTCAATCAAACAAACCCAAAATGAAGAACAACTCTTCGCTCTTATGTCCCCTTATATCAACAGAACACTCTCAATCCGTTTCATGGTCACGCTCCTCTCACGTGAGCCAGATTGGCAACGCTCCCTCGCACTCCTCGATTGGATCAACGACAAGGCACTCTATTCCCCTTCCGTCTTCGCCTACAACGTCGTAATTCGCAACGTGTTACGCGCAAAACAGCATCAGGTTGCACACGGCCTGTTCGACGAAATGCGCCAGAAGGGACTTGCACCAGATAGATACACTTACTCAACACTCATCACTTATTTCGGGAAGAATGGAATGTTTGATTTGTCTTTGTTCTGGCTCCAGCAGATGGAGCAGGACAATGTCTCCGGTGACCTTGTTTTGTATAGCAACTTGATTGAGCTTTCGCGGAAGCTTCGCGATTACTCCAAGGCGATTTCGATATTCATGAGGTTGAAGAGTGCTGGGATTGTTCCTGACCTCGTGGCTTATAACACGATGATCAATGTGTTTGGGAAGGCAAAGTTGTTCCGTGAGGCGAGGGTTTTGATTCAGGAGATGAGGGCCAATGGGGTTCAGCCGGATACTGTTAGCTACTCCACGCTGCTTGTTGTGTATGTTGAGAATGGGAAGTTCGTTGAGGCGCTTTCGGTGTTCAATGAGATGAATGAAGGGAGGTGCCCGCTTGATCTCACGACTTGCAATGTCATGATTGATGTTTATGGACAGCTTGACATGGCCAAAGAAGCTGATAGGTTGTTTTGGAGTATGAGGAAGATGGGGATTGAGCCTAATGTGGTTAGTTATAATACACTGTTGAGGGTGTATGGAGAGGCTGAGCTGTTTGGGGAAGCCATACATCTGTTTCGGTTGATGCAGAGGAAGGATGTGGAGCAGAATGTTGTGACGTATAACACCATGATTAAGATCTATGGCAAGACTCTTGAGCACGAGAAGGCTACGAATCTCATTCAGGAAATGCAGAATAGGGGTATTGAGCCGAATGCCATCACTTATTCGACGATAATATCTATCTGGGGGAAGGCGGGGAAGCTGGACAGGGCAGCCATGTTGTTTCAGAAGTTGAGGAGCTCGGGAGTTGATATTGACCAGGTTCTTTACCAGACGATGATTGTTGCCTATGAGAGGGCTGGTTTAGTCGCTCATGCCAAGCGTCTGCTTCATGAACTCCGGCAACCGGATAACATTCCTAGAGAGACAGCGATCACAATTCTTGCTAGGGCTGGTAGAATTGAAGAGGCTACATGGGTTTTCCGGCAGGCTTTTGATTCTGGAGAGGTGAAAGATATATCTGTTTTTGGATGCATGATTGATCTTTTCTCGAGGAACAAAAAACATGCAAATGTTGTTGAAGTATTTGAGAAGATGAGGGAGGTGGGATATTTTCCTGATTCCAATGTTATTGCTCTTGTGTTGAATGCTTTAGGAAAGCTGCGTGAGTTTGAGAAAGCAGATGCTTTATATAGAGAAATGCAAGAAGAAGGGTGTGTTTTTCCGGATGAAGTTCATTTCCAGATGCTCAGTCTATATGGGGCAAGAAAGGATTTCACAATGGTAGAGTCATTGTTCGAGAAGCTGGATTTGAATCCCAACATTAATAAGAAGGAGTTGCATCTTGTTGTTGCCAGTATCTTTGAAAGAGCAGATAGACTCAATGATGCTTCACGAATCATGAACAGGATTCATCGAAATGCAATTTGA 2013 0.458 MCVVPFSITCSSLPRLPLSSPSTYSLPFPSSSKTATTPTTTATFSKSATAKDVWTNNDNIKRRRTLSRTQQQEQQQRNHRHTYLDHSVDMDELLTSIKQTQNEEQLFALMSPYINRTLSIRFMVTLLSREPDWQRSLALLDWINDKALYSPSVFAYNVVIRNVLRAKQHQVAHGLFDEMRQKGLAPDRYTYSTLITYFGKNGMFDLSLFWLQQMEQDNVSGDLVLYSNLIELSRKLRDYSKAISIFMRLKSAGIVPDLVAYNTMINVFGKAKLFREARVLIQEMRANGVQPDTVSYSTLLVVYVENGKFVEALSVFNEMNEGRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGEAELFGEAIHLFRLMQRKDVEQNVVTYNTMIKIYGKTLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELRQPDNIPRETAITILARAGRIEEATWVFRQAFDSGEVKDISVFGCMIDLFSRNKKHANVVEVFEKMREVGYFPDSNVIALVLNALGKLREFEKADALYREMQEEGCVFPDEVHFQMLSLYGARKDFTMVESLFEKLDLNPNINKKELHLVVASIFERADRLNDASRIMNRIHRNAI* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 432 466 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 221 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 536 568 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 189 222 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 434 467 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 259 293 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 575 604 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 330 363 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 364 397 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 399 433 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 155 187 IPR002885 -
Aev03g1573 670 TIGRFAM PPR: pentatricopeptide repeat domain 294 327 IPR002885 -
Aev03g1573 670 MobiDBLite consensus disorder prediction 59 80 - -
Aev03g1573 670 Gene3D Tetratricopeptide repeat domain 234 379 IPR011990 GO:0005515
Aev03g1573 670 Gene3D Tetratricopeptide repeat domain 509 668 IPR011990 GO:0005515
Aev03g1573 670 Gene3D Tetratricopeptide repeat domain 89 233 IPR011990 GO:0005515
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 152 186 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Aev03g1573 670 MobiDBLite consensus disorder prediction 22 42 - -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 467 501 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 533 567 IPR002885 -
Aev03g1573 670 SUPERFAMILY HCP-like 210 471 - -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Aev03g1573 670 PANTHER OS03G0856100 PROTEIN 37 667 - -
Aev03g1573 670 Pfam PPR repeat 469 495 IPR002885 -
Aev03g1573 670 Pfam PPR repeat 575 600 IPR002885 -
Aev03g1573 670 Pfam PPR repeat 224 254 IPR002885 -
Aev03g1573 670 Pfam PPR repeat 536 564 IPR002885 -
Aev03g1573 670 Pfam PPR repeat family 397 440 IPR002885 -
Aev03g1573 670 Pfam PPR repeat family 327 371 IPR002885 -
Aev03g1573 670 Pfam PPR repeat family 151 196 IPR002885 -
Aev03g1573 670 Pfam PPR repeat family 256 300 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Aev03g1573 670 Gene3D Tetratricopeptide repeat domain 380 508 IPR011990 GO:0005515
Aev03g1573 670 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 568 602 IPR002885 -
Aev03g1573 670 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTIC 37 667 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1573 152 631 Glycosyltransferase AT1G05670 23.457 2.80e-43 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1573 - - jre:109008930 1035.02