Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1099 ATGCCTTCCCTTCAGCTGTTGCAACTAACTGAGCATGGCCGGAGTTTTCTGGCTTCAAGGAGGAAAACTTTACTCCTTGCAACTGGTATCTTAGCTGCCGGTGGAACAGCTGCATATATGCAATCAAGGTTTAGAGCTAATGGACATGATTTATTAGGCCATTGCAATGGGCACAACAATGATAAAGAAGTCACAACAGAGGAGGTTCTGAAGGGCGCGGCTTCACCTAAAGCTAAACAAAAGAAAGGAGGGCTGAAGTCACTTCAAATCCTTGCTGCCATTCTGCTCTCGGAGATGGGCAAATTAGGTGCAAGGGACCTTTTATCTTTAGTTGGCATAGTGGTGTTGCGAACTGCTTTGAGCAACAGACTAGCAAAAGTGCAAGGATTCCTTTTTCGAGCTGCTTTTCTTCGACGCGTGCCATTGTTTTTTCGGCTAATTTCAGAAAACATTCTTTTATGCTTCCTTTTATCAACCATTCAGTCTACATCAAAGTACGTAACAGGGACTTTGAGTCTTCATTTCAGAAAGATATTGACAAAGCTTATCCATTCCCATTATTTTGAGAACATGGTGTATTACAAAATATCACACGTTGATGGTCGGATAACAAACCCAGAGCAGAGAATTGCCAGTGATGTACCAAGGTTCTGTTCAGAGCTGAGCGAAATTGTACAGGATGATCTAACAGCAGTGACTGATGGACTTCTGTACACTTGGAGGCTGTGTTCATATGCTAGCCCAAAATACGTCTTTTGGATATTGGCATATGTACTCGGAGCTGGTGCTGCAATCAGAAACTTCTCCCCTTCATTTGGGAAACTTATGTCCAAAGAACAGCAACTGGAAGGAGAGTATCGACAGCTTCACTCACGGTTAAGGACTCATTCAGAAAGTATAGCATTCTATGGTGGAGAAAAGAGAGAAGAATCTCATATTCAACAGAAGTTTAAGACCTTGGTTAGACACCTGAATGTTGTGCTACATGACCATTGGTGGTTTGGCATGATTCAGGACTTTTTGTTGAAGTACCTTGGTGCTACTGTTGCCGTCATCTTGATTATTGAACCTTTCTTTTCTGGCCATTTAAGGCCTGACAGTTCAACCCTAGGGCGTGCAGAGATGTTAAGCAATCTAAGATATCATACTAGTGTCATAATTTCCCTATTTCAGTCTCTTGGAACTCTTTCTATCAGTGCTAGACGGCTTAATCGTCTCAGTGGGTATGCTGATCGTATTTATGAGTTGATGGCTGTATCAAGGGAGCTAAGCCTGGTTGATGAGAAATCTTCGCTGCAAAGAAAAGGGAGTAGAAATTGTATAAGTGAAGCTAACTACATTGAATTTTCTGGTGTCAAGGTTGTGACCCCCACTGGTAATGTCTTGGTGGATGATCTGACCCTTAGGGTTGAATCAGGATCTAATCTTTTGATTACAGGTCCAAATGGCAGTGGAAAGAGCTCCCTTTTCCGTGTTCTAGGTGGTCTTTGGCCATTGATATCTGGACATATTGTGAAACCAGGCATTGGCTCTGATCTCAACAAGGAGATTTTCTATGTGCCACAAAGACCATACACTGCTGTAGGAACACTTCGTGATCAGCTAATTTATCCTCTTACTGCATACCAAGAGGTTGAACCACTCACAGAAAGTGGGATGGTGGAGCTATTGAAAAATGTTGACCTTGAATATCTGTTGGACCGTTACCCACCTGAAAAAGAGGTAAATTGGGGTGATGAACTTTCATTGGGTGAGCAGCAGAGATTGGGCATGGCCAGACTTTTCTACCATAAGCCTAAATTTGCAATTCTTGATGAGTGCACAAGTGCTGTGACTACTGATATGGAAGAACGGTTTTGTGCTAAAGTTCGAGCTATGGGAACATCATGCATTACCATATCACACCGTCCAGCATTAGTTGCATTCCATGATGTGGTTTTATCGTTAGATGGTGAAGGAGGATGGAGTGTTCATTATAAAAGGGAGGACTCTTCTTCTGAAAAGGGGATTGATACAATGAAGGCATCGGAGACAAAACGGCAGAGTGATGCAAAAGCAGTTCAACTTGCATTTTCCATGAGCAAAAAGGATTCTGCATTCTCAAATTCAAAGGCCCAGTCATATATTGCAGAAGTTATATCATCATCTCCATCTATGAATCATTCTATATCACCATCTGCTGTTCCCCAACTCCGTGGTAATACAAGGCAATTGCCACTGAGAATAGCTGCCATGTGCAAAGTATTGGTCCCCACCGTACTTGATAAACAAGGAGCACAACTGCTTGCTGTAGCTTTTCTTGTTGTTTCAAGAACATGGGTCTCAGATCGTATTGCATCGTTGAATGGCACCACTGTGAAGTTTGTTCTGGAGCAGGACAAAGCTGCCTTTATTCGGTTGATTGGTATAAGTGTTCTCCAAAGTGCTGCATCTTCATTCATTGCACCTTCTATTAGACACTTGACAGCCAGGCTGGCCCTTGGGTGGCGGATTCGTTTGACACAACATCTACTCAAGAACTATTTGAGAAACAATGCATTCTACAAGGTCTTCCACATGGCAAGCAAAAACATTGATGCAGATCAGAGGATAACTCATGACTTGGAGAAGTTAACAACGGACTTATCTGGACTGGTCACTGGATTGGTAAAGCCATCTGTGGATATTTTATGGTTCACATGGAGAATGAAGCTGCTAACTGGTCAGAGGGGAGTTGCCATACTCTATGCTTACATGTTACTTGGTCTGGGATTTCTAAGAACTGTTACTCCTGATTTTGGTGATTTGATGAGCCAAGAACAACAACTTGAAGGAACCTTTCGATTTATGCATGAAAGACTCTGTACTCATGCTGAATCTGTTGCTTTCTTTGGAGGTGGTGTTCGAGAAAAAGCTATGGTTGAGTCTAGATTCAGAGATCTTCTTGCCCATTCAAAGTATCTTCTAAAAAAGAAGTGGATGTTTGGTATACTGGATGATTTTATAACAAAGCAACTTCCTCATAATGTGACTTGGTTGCTGAGTTTGTTATATGCCATGGAGCATAGGGGAGACCGTGCATCAATAAATACTCAGGGTGAGCTGGCACATGCATTGAGGTTCTTAGCATCTGTTGTTTCTCAAAGCTTTTTAGCTTTCGGTGACATTCTTGAACTGAATAGGAAGTTTGTAGAGCTCTCTGGTGGTATTAATCGGATTTTTGAGCTTGAAGAACTCCTGGATGCAGCACAGTCTGGGACTATGATCAGTGATGGTATACCTCCACTGAGGGATTCTCATTCTAAAGATGTTATTTCATTTTCAAAGGTTGATATTGTAACCCCTACTCAGAAGATGTTGGCCAGGGAGTTGACATGTGACATTGAGCTTGGGGGAAGTCTCCTTGTTACTGGTCCAAATGGAAGTGGAAAAAGTTCCATTTTCAGAGTTCTTAGAGGACTTTGGCCCATTGCAAGCGGAAGACTCTCTAGACCACCTGAAGATGTGGATCTAGAAGCTGGATCCGGTTGTGGCATCTTCTATGTTCCTCAGCGGCCCTATACTTGCTTGGGAACCCTTCGGGATCAAATTATATACCCCCTGTCCCGTGAGGAAGCAGAGGTTAGAGCATTGAAGATCTATGGAAAAGGTAAAAACCATCCTGCCACCGGAAATTTTTTGGATACACACTTGCAAGTTATCCTTGAGAATGTTCGGTTGAATTATCTTCTAGAAAGGGAGAAGAATGGCTGGGATGCAAATCTAAAATGGGAAGACATTCTTTCTCTTGGAGAGCAGCAGAGGTTAGGCATGGCGCGGTTGTTCTTCCATAAGCCTAAATTTGGTATCCTCGACGAGTGCACCAATGCCACTAGCGTTGATGTTGAAGAACACTTATATGGGCTTGCAAAGGATATGGGAATCACATTTGTTACTTCTTCACAACGTCCTGCTTTAATACCATACCATTCCTTGGAACTACGACTGATCGATGGCGAGGGTAATTGGGAGCTTCGCTTGATCAAGCAATGA 4011 0.4263 MPSLQLLQLTEHGRSFLASRRKTLLLATGILAAGGTAAYMQSRFRANGHDLLGHCNGHNNDKEVTTEEVLKGAASPKAKQKKGGLKSLQILAAILLSEMGKLGARDLLSLVGIVVLRTALSNRLAKVQGFLFRAAFLRRVPLFFRLISENILLCFLLSTIQSTSKYVTGTLSLHFRKILTKLIHSHYFENMVYYKISHVDGRITNPEQRIASDVPRFCSELSEIVQDDLTAVTDGLLYTWRLCSYASPKYVFWILAYVLGAGAAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHSESIAFYGGEKREESHIQQKFKTLVRHLNVVLHDHWWFGMIQDFLLKYLGATVAVILIIEPFFSGHLRPDSSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISARRLNRLSGYADRIYELMAVSRELSLVDEKSSLQRKGSRNCISEANYIEFSGVKVVTPTGNVLVDDLTLRVESGSNLLITGPNGSGKSSLFRVLGGLWPLISGHIVKPGIGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTAYQEVEPLTESGMVELLKNVDLEYLLDRYPPEKEVNWGDELSLGEQQRLGMARLFYHKPKFAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWSVHYKREDSSSEKGIDTMKASETKRQSDAKAVQLAFSMSKKDSAFSNSKAQSYIAEVISSSPSMNHSISPSAVPQLRGNTRQLPLRIAAMCKVLVPTVLDKQGAQLLAVAFLVVSRTWVSDRIASLNGTTVKFVLEQDKAAFIRLIGISVLQSAASSFIAPSIRHLTARLALGWRIRLTQHLLKNYLRNNAFYKVFHMASKNIDADQRITHDLEKLTTDLSGLVTGLVKPSVDILWFTWRMKLLTGQRGVAILYAYMLLGLGFLRTVTPDFGDLMSQEQQLEGTFRFMHERLCTHAESVAFFGGGVREKAMVESRFRDLLAHSKYLLKKKWMFGILDDFITKQLPHNVTWLLSLLYAMEHRGDRASINTQGELAHALRFLASVVSQSFLAFGDILELNRKFVELSGGINRIFELEELLDAAQSGTMISDGIPPLRDSHSKDVISFSKVDIVTPTQKMLARELTCDIELGGSLLVTGPNGSGKSSIFRVLRGLWPIASGRLSRPPEDVDLEAGSGCGIFYVPQRPYTCLGTLRDQIIYPLSREEAEVRALKIYGKGKNHPATGNFLDTHLQVILENVRLNYLLEREKNGWDANLKWEDILSLGEQQRLGMARLFFHKPKFGILDECTNATSVDVEEHLYGLAKDMGITFVTSSQRPALIPYHSLELRLIDGEGNWELRLIKQ* 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1099 1336 Pfam ABC transporter 464 609 IPR003439 GO:0005524
Aev03g1099 1336 Pfam ABC transporter 1116 1282 IPR003439 GO:0005524
Aev03g1099 1336 SUPERFAMILY ABC transporter transmembrane region 143 417 IPR036640 GO:0005524|GO:0016021
Aev03g1099 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev03g1099 1336 Pfam ABC transporter transmembrane region 2 91 359 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev03g1099 1336 Pfam ABC transporter transmembrane region 2 746 1011 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev03g1099 1336 Gene3D - 1090 1327 IPR027417 -
Aev03g1099 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 447 678 IPR003439 GO:0005524
Aev03g1099 1336 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 81 599 - -
Aev03g1099 1336 ProSitePatterns ABC transporters family signature. 1254 1268 IPR017871 GO:0005524
Aev03g1099 1336 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 592 1336 - -
Aev03g1099 1336 SUPERFAMILY ABC transporter transmembrane region 761 1069 IPR036640 GO:0005524|GO:0016021
Aev03g1099 1336 Gene3D ABC transporter type 1, transmembrane domain 103 418 IPR036640 GO:0005524|GO:0016021
Aev03g1099 1336 CDD ABCD_peroxisomal_ALDP 1098 1329 - -
Aev03g1099 1336 ProSitePatterns ABC transporters family signature. 581 595 IPR017871 GO:0005524
Aev03g1099 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1094 1325 IPR027417 -
Aev03g1099 1336 Gene3D - 434 708 IPR027417 -
Aev03g1099 1336 CDD ABCD_peroxisomal_ALDP 447 655 - -
Aev03g1099 1336 SMART AAA_5 472 651 IPR003593 -
Aev03g1099 1336 SMART AAA_5 1123 1335 IPR003593 -
Aev03g1099 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1098 1334 IPR003439 GO:0005524
Aev03g1099 1336 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER 81 599 - -
Aev03g1099 1336 PANTHER ABC TRANSPORTER D FAMILY MEMBER 1 592 1336 - -
Aev03g1099 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 445 651 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1099 Aev-Chr3 9627339 9638347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1099 1 1336 Acyl Lipid Metabolism Gene Families AT4G39850 78.151 0.0 2145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1099 K25819 - gmx:100813765 2399.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0880 04 5337201 5339450 Aev03g1099 03 9627339 9638347 PCT