Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1008 ATGAAGCACCAAGATCACGACCACAACGACAACAAACCTGTGGTTCTTATCACGGGTTGTTCCGAGGGAGGGATAGGCCACGCGCTTGCACGCGCCTTCGCCGCCAACAAGTGCGCGGTGGTTGCCACCAGCAGGTCGCGGTCCACCATGGCGGACCTGGAGCACGACCCAAGGTTTTTCCTGCAGGAGATCGATGTCAAGTCCGATGAGAGCGTGCGGCGAGCACTCGACAACGTTATCCGAAAGTTCGGTCGGATCGATGTTCTTGTCAACAATGCTGGGGTTCAGTGTGTGGGTCCTCTTGCTGAGGTTCCTCTCTCTGCGTTCCAAGACACTTATGACACCAACGTGTTCGGTTCATTGAGAATGGTTCAGGCTGTTGTACCTCATATGGCAACTAGGAAACAGGGAAAGATTGTGAATATTGGTAGTGTTACTGCTATGGCCTCTGGGCCATGGTCCGGCGCTTACACTTCATCAAAAGCTGCACTTCATTCTCTCACAGATACCTTGAGATTGGAACTAGGTCATTTTGGAATTGATGTTGTGAATGTTGTCCCTGGTGCTATCAAGTCAAATATTGGAAATTCTGCCATAGCCAGCTACAACCGCATGCCTGAGTGGAACTTATTCAAGCCTTTCGAAGGTGCAATCCGAGATAGAGCCTATTTTTCTCAGAGATCCAAGTCAACACCATCAGATGAGTTTGCTAAACACACTGTGGCCACTATCATGAAGAAGAAACCGCCGGCGTGGTTCTCCTATGGTCATTACTCTACTGCCATGGCCATCATGTACCATCTGCCACTATGTATTAGGGACTTCATTTTGAAGAAAGCAATGAAATGCTGA 852 0.493 MKHQDHDHNDNKPVVLITGCSEGGIGHALARAFAANKCAVVATSRSRSTMADLEHDPRFFLQEIDVKSDESVRRALDNVIRKFGRIDVLVNNAGVQCVGPLAEVPLSAFQDTYDTNVFGSLRMVQAVVPHMATRKQGKIVNIGSVTAMASGPWSGAYTSSKAALHSLTDTLRLELGHFGIDVVNVVPGAIKSNIGNSAIASYNRMPEWNLFKPFEGAIRDRAYFSQRSKSTPSDEFAKHTVATIMKKKPPAWFSYGHYSTAMAIMYHLPLCIRDFILKKAMKC* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1008 283 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 193 - -
Aev03g1008 283 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 144 172 IPR020904 GO:0016491
Aev03g1008 283 PANTHER BNAC02G00550D PROTEIN 9 281 - -
Aev03g1008 283 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 273 IPR036291 -
Aev03g1008 283 Gene3D - 12 269 - -
Aev03g1008 283 PANTHER NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE 9 281 - -
Aev03g1008 283 Pfam short chain dehydrogenase 14 197 IPR002347 -
Aev03g1008 283 PRINTS Glucose/ribitol dehydrogenase family signature 15 32 IPR002347 -
Aev03g1008 283 PRINTS Glucose/ribitol dehydrogenase family signature 178 195 IPR002347 -
Aev03g1008 283 PRINTS Glucose/ribitol dehydrogenase family signature 131 147 IPR002347 -
Aev03g1008 283 PRINTS Glucose/ribitol dehydrogenase family signature 157 176 IPR002347 -
Aev03g1008 283 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Aev03g1008 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 IPR002347 -
Aev03g1008 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 IPR002347 -
Aev03g1008 283 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Aev03g1008 283 CDD 17beta-HSD-like_SDR_c 14 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1008 Aev-Chr3 8432697 8436167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1008 14 194 Acyl Lipid Metabolism Gene Families AT1G62610 29.897 3.71e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1008 - - gmx:100789660 469.929