Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0960 ATGGGAGGAAAATCACTTAAATCTGCGAGTAGGCTACAAGAGCTATCGCGGATTGTGTCATCTGCGAAACCCCAAAGGCCGAAACAAACGCAACCCAGATCCGCCACCGCCAAACAGGGTTCAATTAGGATCGAATCTCCGACGAAGGAGATTGTCGGAACGGAGAAGTGTCGGACACCACTCGCCACGGTGGTTGCCGATTGCGCAAAGCGGTGGTTCCATGAGACGCTCAAGGAGGCCAAGGCTGGTGACTCCGCCATGCAGGTTCTCGTTGGTCAAATGTATTACACTGGCTATGGTGTTCCCAGAAATCCTAAAAAGGGACATGCTTGGATTAGTAAAGTATCTAGAATTCGAAGTTCAGTTTGGAAAGTAAGCGAAAAACATCCAGGTTACAGAGTAAGTGATTCAGATTCATGTGAAGCAGAGAACCAAGCTAAATCTTATCAATAA 453 0.4746 MGGKSLKSASRLQELSRIVSSAKPQRPKQTQPRSATAKQGSIRIESPTKEIVGTEKCRTPLATVVADCAKRWFHETLKEAKAGDSAMQVLVGQMYYTGYGVPRNPKKGHAWISKVSRIRSSVWKVSEKHPGYRVSDSDSCEAENQAKSYQ* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0960 150 MobiDBLite consensus disorder prediction 9 43 - -
Aev03g0960 150 PANTHER EXPRESSED PROTEIN 3 147 - -
Aev03g0960 150 SUPERFAMILY HCP-like 77 117 - -
Aev03g0960 150 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 3 147 - -
Aev03g0960 150 SMART sel1 85 120 IPR006597 -
Aev03g0960 150 MobiDBLite consensus disorder prediction 130 150 - -
Aev03g0960 150 Gene3D Tetratricopeptide repeat domain 5 117 IPR011990 GO:0005515
Aev03g0960 150 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0960 Aev-Chr3 7937669 7938637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0960 - - adu:107469327 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0547 07 3370065 3371363 Aev03g0960 03 7937669 7938637 ECH
Aev03g0960 03 7937669 7938637 Aev03g0960 03 7937669 7938637 ECH