Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0805 ATGGCATACAAAGTGGACCATGAATACGACTATCTGTTCAAGATTGTACTGATTGGTGACTCTGGTGTTGGAAAATCCAACATCCTCTCCAGGTTCACCCGAAATGAGTTCTGCTTGGAATCTAAGTCCACCATTGGGGTTGAATTTGCAACCAGAACATTGCAGGTGGAAGGCAAGACAGTGAAGGCACAAATATGGGACACAGCAGGTCAAGAAAGGTACCGAGCAATCACAAGTGCATACTACAGAGGAGCCGTTGGTGCTTTGTTGGTCTATGACATCACCAAGAGGCAAACATTTGACAATGTTCAGAGGTGGCTTAGGGAACTTAGGGACCATGCCGACTCCAACATCGTCATCATGTTAGCCGGTAACAAGAACGACCTCAATCATCTTCGGGCAGTTTCGTCCGAAGATGTGAGGAGTTTGGCCGAGAGGGAAAGCCTCTCGTTCCTTGAAACCTCCGCATTGGAGGCTTTCAATGTCGAGAAGGCCTTCCAAATCATTTTGTATGATATATATCACATTATAAGTAAAAAAGCACTTGCCGCTCAAGAAGCAGCAGCTTCTTCCACTAGTGTTCCTAGAGGAACTACAATAAATGTGTCAAATATGTCAGGCTTTGTTCCAGAGTTGTGGTTGGAAGGAAAAGAGAAGAAAGGGAGAGATTTTGAGGGAAGAAATTATGTTTGA 693 0.4459 MAYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMLAGNKNDLNHLRAVSSEDVRSLAERESLSFLETSALEAFNVEKAFQIILYDIYHIISKKALAAQEAAASSTSVPRGTTINVSNMSGFVPELWLEGKEKKGRDFEGRNYV* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0805 230 Pfam Ras family 14 173 IPR001806 GO:0003924|GO:0005525
Aev03g0805 230 ProSiteProfiles small GTPase Rho family profile. 6 188 - -
Aev03g0805 230 ProSiteProfiles small GTPase Rab1 family profile. 8 210 - -
Aev03g0805 230 PRINTS Transforming protein P21 ras signature 116 129 - -
Aev03g0805 230 PRINTS Transforming protein P21 ras signature 36 52 - -
Aev03g0805 230 PRINTS Transforming protein P21 ras signature 54 76 - -
Aev03g0805 230 PRINTS Transforming protein P21 ras signature 13 34 - -
Aev03g0805 230 PRINTS Transforming protein P21 ras signature 151 173 - -
Aev03g0805 230 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 178 IPR027417 -
Aev03g0805 230 SMART rab_sub_5 13 176 - -
Aev03g0805 230 SMART ras_sub_4 10 176 - -
Aev03g0805 230 SMART rho_sub_3 15 172 IPR001806 GO:0003924|GO:0005525
Aev03g0805 230 ProSiteProfiles small GTPase Ras family profile. 1 230 IPR001806 GO:0003924|GO:0005525
Aev03g0805 230 CDD Rab11_like 10 174 - -
Aev03g0805 230 PANTHER - 1 208 - -
Aev03g0805 230 Gene3D - 5 203 IPR027417 -
Aev03g0805 230 PANTHER RAS-RELATED PROTEIN RAB11C-LIKE 1 208 - -
Aev03g0805 230 TIGRFAM small_GTP: small GTP-binding protein domain 11 169 IPR005225 GO:0005525
Aev03g0805 230 SMART ran_sub_2 18 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0805 Aev-Chr3 6353447 6355834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0805 K07904 - twl:119989186 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0805 03 6353447 6355834 Aev03g0805 03 6353447 6355834 ECH
Aev03g0805 03 6353447 6355834 Aev07g2372 07 24473703 24475090 PCT