Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev03g0794 | ATGAATGGCGAAGGGAGTGAAGCTGCATTGGAAAGGGGGAAGCAGAGGTTGGTCTACATGTGGGGTTACCTCCCCGGAGCTCTGCCGCAGAGGACGCCGCTATTGACGCCGGTGCTAGCTAGGGTTCCGCCGTCCGGCTACTCCTGGAGGGATGTTTGCGGTGGTGGTTGTGGATTCGCCATGGCTATTTCTGATTCAGGAAAACTCATAACATGGGGTTCAACAGATGATCTTGGCCAAAGCTATGTGACTTCTGGAAAGCATGGGGAAACTCCAGAGCCTTTCCCTCTTCCAACTGAAGCATCTATTGTAAAAGCTGCAGCTGGATGGGCACATTGTGTCTCTGTAACAGATTGTGGAGAGGTTTACACATGGGGATGGAAAGAATGTATTCCCTCGGGGAAGGTATTTGGTGAGCCATCAACCGGGGTAAGTCCTGAAAAAGATGTAGCGGGAAGGCAGAGTTCATTCGTGACGGAGCAAGTGAGCCCTCGTTCTCAAGGCTCAAAATCTACAGGTGGAACAACATCCAGTACAAGTGGAGAAGAAAGTACAAAGCGTCGGAGAACGTCTTCAGCAAAGCAAACAGCTGAAACATCATCTAGTGATGATAATCTGACAGCATTTCCATGTCTTGTTACGCTGAACCCAGGTGTAAGGATAGTTAGTGTTGCCGCTGGCGGACGCCATACCCTAGCATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGTTCCAGAATACGTATGGTGTCTTCTCCTCATCTTGTTCCTTGTATTGATACCTCTTCTTATGGTAAAGATAGATCGTCATCGTTGGCTCGAGGAAGCATGAGTTCAGAGGGACAGAACTTCAGAGTTCCTGGAAGTTATATCAAGAGCATTACATGTGGAGGTCGACACAGTGCAGTAATCACAGATGCTGGAGCTGTGCTTGCTTTTGGTTGGGGACTTTATGGACAGTGTGGGCAAGGAAGTACAGATGATGAACTGAGCCCGACCTGCGTATCTTCTTTACTGGGAATCCGAATAGATGGAGTCGCGGCAGGACTGTGGCATACTGTCTGTACATCTGCTGATGGTGATGTATATGCATTTGGTGGGAACCAGTTTGGGCAGCTGGGGACTGGTAGTGATCAAGCCGAGACTCTGCCAAGGCTATTGGACTCTCCGGGTTTGGAAAATAAGAATGTAAAGAGCATCTCTTGTGGGGCTCGTCACACTGCTCTAATAACAGTGGATGGAAAGGTCTTCTGCTGGGGATGGAACAAGTATGGACAGTTGGGCCTTGGGGATGTGATTGACCGTAACATCCCTTCCGAAGTCACAATCGAAGGTTGTGTCGCGAAAAACGTCGCATGCGGCTGGTGGCATACGCTTCTTCTAGCCGAGTCGCCCACTTGA | 1431 | 0.4983 | MNGEGSEAALERGKQRLVYMWGYLPGALPQRTPLLTPVLARVPPSGYSWRDVCGGGCGFAMAISDSGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSVTDCGEVYTWGWKECIPSGKVFGEPSTGVSPEKDVAGRQSSFVTEQVSPRSQGSKSTGGTTSSTSGEESTKRRRTSSAKQTAETSSSDDNLTAFPCLVTLNPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLVPCIDTSSYGKDRSSSLARGSMSSEGQNFRVPGSYIKSITCGGRHSAVITDAGAVLAFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIDGVAAGLWHTVCTSADGDVYAFGGNQFGQLGTGSDQAETLPRLLDSPGLENKNVKSISCGARHTALITVDGKVFCWGWNKYGQLGLGDVIDRNIPSEVTIEGCVAKNVACGWWHTLLLAESPT* | 477 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev03g0794 | 476 | MobiDBLite | consensus disorder prediction | 148 | 181 | - | - | |
| Aev03g0794 | 476 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 238 | 317 | IPR000408 | - | |
| Aev03g0794 | 476 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 67 | 119 | IPR000408 | - | |
| Aev03g0794 | 476 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 13 | 476 | - | - | |
| Aev03g0794 | 476 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 304 | 314 | IPR000408 | - | |
| Aev03g0794 | 476 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 423 | 471 | IPR000408 | - | |
| Aev03g0794 | 476 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 318 | 365 | IPR000408 | - | |
| Aev03g0794 | 476 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 369 | 420 | IPR000408 | - | |
| Aev03g0794 | 476 | Gene3D | - | 5 | 159 | IPR009091 | - | |
| Aev03g0794 | 476 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN | 13 | 476 | - | - | |
| Aev03g0794 | 476 | SUPERFAMILY | RCC1/BLIP-II | 18 | 474 | IPR009091 | - | |
| Aev03g0794 | 476 | MobiDBLite | consensus disorder prediction | 138 | 203 | - | - | |
| Aev03g0794 | 476 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 224 | 234 | IPR000408 | - | |
| Aev03g0794 | 476 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 370 | 423 | IPR000408 | - | |
| Aev03g0794 | 476 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 424 | 474 | IPR000408 | - | |
| Aev03g0794 | 476 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 221 | 250 | - | - | |
| Aev03g0794 | 476 | Gene3D | - | 273 | 476 | IPR009091 | - | |
| Aev03g0794 | 476 | Gene3D | - | 190 | 272 | IPR009091 | - | |
| Aev03g0794 | 476 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 318 | 369 | IPR000408 | - | |
| Aev03g0794 | 476 | PRINTS | Chromosome condensation regulator RCC1 signature | 224 | 240 | IPR000408 | - | |
| Aev03g0794 | 476 | PRINTS | Chromosome condensation regulator RCC1 signature | 103 | 116 | IPR000408 | - | |
| Aev03g0794 | 476 | PRINTS | Chromosome condensation regulator RCC1 signature | 359 | 377 | IPR000408 | - | |
| Aev03g0794 | 476 | PRINTS | Chromosome condensation regulator RCC1 signature | 419 | 440 | IPR000408 | - | |
| Aev03g0794 | 476 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 410 | 420 | IPR000408 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aev03g0794 | Aev-Chr3 | 6257777 | 6262811 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev03g0794 | - | - | gmx:100778841 | 833.172 |