Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0793 ATGACGTCACCGAAGCCTTCATTAGCGTCGGAATTGGAAGAGAGGATGGTGGATTTCAAGCCGTTCTCGGAATCGCAACCTGGATCGTCGTGCTCGCGATCGATCAGTGAGACAGTGAACGGTTCACACCAATTCACGATAAAGGGTTACGCTCTGGCGAAAGGGATGGGAGCTGGGAAATACATAATGAGCGACACGTTCAGCGTTGGTGGGTACGATTGGGCAATATACTTCTACCCTGATGGGAAGAACCCGGAGGATAATTCCATGTACGTTTCGGTGTTTATTGCGCTGGCGAGTGAGGGGACCGATGTGAGGGCGCTGTTCAAGCTGACGCTTGTGGATCAGAGCGAGAAAGGGAACGATAAAGTTCATAGCCACTTCGATCGACCACTTGAGAGTGGGCCTTACACTTTGAAGTATCGAGGCAGCATGTGGGGTTACAAGCGATTTTTCAGAAGAACACAGTTGGAAACTTCGGAATATCTGAAAAATGATTGCCTCATCATGCATTGCACTGTTGGTGTTGTCAAAACTCGTTTCGAGGGATCTAAACAGGGTGTTATTGTGCCCCAGTCAAACATGGGCCGAGATTTTAAGGACTTGTTTGAATCTGAAGTTGGTTGTGACATAGTTTTCAAGGTCAAGAGTGAAAGCTTCAAAGCTCATAAGTTGATACTTGCTGCCCGATCTCCTGTGTTTAGAGCGCAGTTTTTTGGACTTGTTGGGGATCCTAGCATAGATGAAGTAGTGGTTCATGATATCGAGCCTTTTATCTTCAAGGCAATGCTTCTCTTCATATACACAGACAAACTGCCTGACATATATGAAGTTATGGGCTCAATACCCATGTGCTCATCTACTGTCATGGTGCAGCATCTCTTGGCTGCTGCTGATCTTTACAATCTTGATCGGCTAAAACTGCTATGTGAATCAAAATTGAGTGAAGAAATCAATACTGACAATGTGGCCACAACACTTGCTCTGGCTGAGCAACACCATTGTCCACAGCTTAAGGCGATCTGTTTGAAATTTATTGCAAATCCAGCAAACTTGGGAGTGGTAATGCAGTCCGAAGCTTTTGTGCATTTGAAAGAGAGTTGCCCCTCAATGCTGTTGGAATTGCTGGAGACATTTGCATCAGTAGATGATAACTCAGGCCAACCATTGAGCCGGAAAAGAAGCGGCAGTAGCATATATGGACAAGATTTAGCAGATGGCGCCGCGGCTGAATCAGTTAATCCAAATGGCAGGCGTATCAGGAGGCGGACATAA 1275 0.4604 MTSPKPSLASELEERMVDFKPFSESQPGSSCSRSISETVNGSHQFTIKGYALAKGMGAGKYIMSDTFSVGGYDWAIYFYPDGKNPEDNSMYVSVFIALASEGTDVRALFKLTLVDQSEKGNDKVHSHFDRPLESGPYTLKYRGSMWGYKRFFRRTQLETSEYLKNDCLIMHCTVGVVKTRFEGSKQGVIVPQSNMGRDFKDLFESEVGCDIVFKVKSESFKAHKLILAARSPVFRAQFFGLVGDPSIDEVVVHDIEPFIFKAMLLFIYTDKLPDIYEVMGSIPMCSSTVMVQHLLAAADLYNLDRLKLLCESKLSEEINTDNVATTLALAEQHHCPQLKAICLKFIANPANLGVVMQSEAFVHLKESCPSMLLELLETFASVDDNSGQPLSRKRSGSSIYGQDLADGAAAESVNPNGRRIRRRT* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0793 424 SUPERFAMILY TRAF domain-like 37 176 - -
Aev03g0793 424 CDD MATH 41 174 IPR002083 GO:0005515
Aev03g0793 424 SMART math_3 45 157 IPR002083 GO:0005515
Aev03g0793 424 SMART BTB_4 209 318 IPR000210 GO:0005515
Aev03g0793 424 Gene3D - 317 398 - -
Aev03g0793 424 ProSiteProfiles MATH/TRAF domain profile. 40 174 IPR002083 GO:0005515
Aev03g0793 424 SUPERFAMILY POZ domain 191 316 IPR011333 -
Aev03g0793 424 Pfam BTB/POZ domain 199 316 IPR000210 GO:0005515
Aev03g0793 424 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 39 179 IPR008974 GO:0005515
Aev03g0793 424 ProSiteProfiles BTB domain profile. 209 272 IPR000210 GO:0005515
Aev03g0793 424 Gene3D Potassium Channel Kv1.1; Chain A 185 313 IPR011333 -
Aev03g0793 424 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 28 389 IPR045005 GO:0016567
Aev03g0793 424 CDD BTB_POZ_BPM_plant 195 315 - -
Aev03g0793 424 CDD BACK_AtBPM-like 316 378 IPR034090 -
Aev03g0793 424 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 3 28 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0793 Aev-Chr3 6243893 6247840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0793 K10523 - gmx:100786636 770