Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0767 ATGGAGTCGTCAGTTAAGAAAACAGGGCTGAACCTGCCAGCTGGCATGTCGGGAACCTCACTGCGGCTCGACACATTGTCAGCTTCATCACTCCATGGCATCACATCGCCATCGAAGTCATCATCACCTTCGACCTGCAGTGACAGGTTCATTCCCTGTAGGTCCTCATCGAGGCTCCACACTTTCGGCCTCATCGAGAAGCCATCGCCGGCCAAAGAAGGGACCAACGAGGCCTATTCAAGGCTCTTGAAATCTGAGCTATTCGGCTCTGACTTTGCTTCCCCTTCTTCTTCTTCTTCCATTCAAGCTCCTGGTGCTTCCCCTGTCTCTAGTCCAAGCAAGAATATGCTGAGGTTCAAGACAGATCACTCTGCCCCTTCTTCGCCCTTTTCGCCTTCCGTTTTGAGACAACAGAGCATCTTCTCTTCTGAATCTTCTACCCCTCCTAAGCCTCCCAGGAAAGTTCCCAAGACACCCCACAAGGTTCTGGATGCTCCATCACTTCAAGATGACTTTTACTTGAATCTAGTGGACTGGTCCTCACAGAATGTTCTTGCTGTTGGGCTAGGCACTTGTGTTTATCTATGGAGTGCTTCAAACAGCAAAGTGACTAAGCTATGTGACTTGGGGCCTTATGATGGTGTTTGTTCTGTTCAGTGGACCAGGGAGGGTTCTTACATATCCATTGGCACAAATCTTGGTCAAGTTCAGATTTGGGATGGAACTAAGTGTAAGAAGGTCAGAACAATGGGGGGACATCAAACAAGAACCGGCGTCTTGGCGTGGAATTCGCGCATTTTGGCTTCTGGGAGCAGGGATAGGAACATTCTCCAGCATGACATGAGGGTTTCAAGTGACTTCATTGGCAAGCTTGTTGGCCACAAATCTGAGGTATGTGGATTGAAATGGTCCTGTGATGACAGAGAACTTGCTTCTGGTGGTAATGATAATCAGCTCTTGGTATGGAATCAGCACTCTCAGCAACCAGCTTTGAGACTAACTGAACACACAGCTGCCGTGAAAGCCATTGCTTGGTCGCCTCACCAGAGCAGTCTCCTCGCATCCGGTGGAGGAACCGCCGATAGGTGCATCCGTTTCTGGAACACCACCAATGGCCACCAATTGAACTGTGTTGACACTGGGAGCCAGGTTTGTAATCTTGCTTGGAGTAAAAATGTGAATGAGATAGTAAGCACTCATGGTTACTCACAGAATCAGATTATGGTGTGGAAGTATCCATCACTAGCAAAGGTTGCAACTCTAACTGGCCACAGCATGAGAGTGCTTTACCTTGCAATGTCTCCTGATGGGCAGACAATAGTAACTGGTGCAGGGGATGAAACACTGCGGTTTTGGAATATTTTCCCATCAGTTAAAACACCTGCCCCGGTTAAAGATTCAGGCCTTTGGTCACTCGGGCGCACCCAAATTCGATGA 1437 0.4864 MESSVKKTGLNLPAGMSGTSLRLDTLSASSLHGITSPSKSSSPSTCSDRFIPCRSSSRLHTFGLIEKPSPAKEGTNEAYSRLLKSELFGSDFASPSSSSSIQAPGASPVSSPSKNMLRFKTDHSAPSSPFSPSVLRQQSIFSSESSTPPKPPRKVPKTPHKVLDAPSLQDDFYLNLVDWSSQNVLAVGLGTCVYLWSASNSKVTKLCDLGPYDGVCSVQWTREGSYISIGTNLGQVQIWDGTKCKKVRTMGGHQTRTGVLAWNSRILASGSRDRNILQHDMRVSSDFIGKLVGHKSEVCGLKWSCDDRELASGGNDNQLLVWNQHSQQPALRLTEHTAAVKAIAWSPHQSSLLASGGGTADRCIRFWNTTNGHQLNCVDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMVWKYPSLAKVATLTGHSMRVLYLAMSPDGQTIVTGAGDETLRFWNIFPSVKTPAPVKDSGLWSLGRTQIR* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0767 478 SMART WD40_4 374 411 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 156 197 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 200 240 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 284 323 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 326 368 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 243 280 IPR001680 GO:0005515
Aev03g0767 478 SMART WD40_4 414 453 IPR001680 GO:0005515
Aev03g0767 478 MobiDBLite consensus disorder prediction 141 160 - -
Aev03g0767 478 PANTHER CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED 8 478 IPR033010 GO:0010997|GO:0097027|GO:1904668
Aev03g0767 478 MobiDBLite consensus disorder prediction 95 133 - -
Aev03g0767 478 Gene3D - 113 455 IPR015943 GO:0005515
Aev03g0767 478 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 291 323 - -
Aev03g0767 478 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 332 IPR001680 GO:0005515
Aev03g0767 478 PANTHER PROTEIN FIZZY-RELATED 3 8 478 - -
Aev03g0767 478 SUPERFAMILY WD40 repeat-like 148 454 IPR036322 GO:0005515
Aev03g0767 478 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 421 454 - -
Aev03g0767 478 ProSitePatterns Trp-Asp (WD) repeats signature. 440 454 IPR019775 -
Aev03g0767 478 Pfam WD domain, G-beta repeat 332 368 IPR001680 GO:0005515
Aev03g0767 478 Pfam WD domain, G-beta repeat 288 323 IPR001680 GO:0005515
Aev03g0767 478 Pfam WD domain, G-beta repeat 418 453 IPR001680 GO:0005515
Aev03g0767 478 ProSiteProfiles Trp-Asp (WD) repeats profile. 421 454 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0767 Aev-Chr3 5946715 5949982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0767 288 454 Miscellaneous Gene Families AT5G08390 22.727 4.57e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0767 K03364 - mnt:21408037 824.698