Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0744 ATGATTCCCTTTATCTCTCTCTCTCTCGCGTCACTTGGTACAGTCAGTGACAGTGAGGCGCTGATGGAGCCCTTGCAGGTCAAGGTGGACGGTTTCGCCATGAATTTTCCTCAGATCCAATTCACACATGCATCCACCTCCTCTGTTCCACCTCCTGCTCCAGCTCGTTTGACAGAACGCTTGATGCACAAAAATCGTCTACAAGAATTCGCTCTGAGGTCAAGCATGGCTCTTCCCGTGTATCAAACTAGCAATGAGGGACTTCCACATGCTCCAAGGTTTAGGTCAACAGTGTGGGTGGATGAGATGAGCTACACTTCCCCGAATACTTTCTCTCAACGAAAAGCTGCCGAACAGGATGTTGCCAGGCTTGCTTTGGAGAACCTTATGAAAAGAATTAAAGATGAAGAATACCCTCTTGTTTATGAGAGTACTTTGTTTCTTTCCAAGTCTATCTTGAATGAATTTGCTACTAAGCTGAGTGTGGAAAGACCTACTTATGACACTATTCAGCTTGAAGGGTTGCTTCCTCATTTCCAATCTTATATTGTTTTCAATGGTACAAAATACACTGGTGATACTGCTAGAAACAAAAAAGAGGCGGAGCAGTTAGCAGCACGTGCTGCTATTCGTTCAATTCTAGGTGATTCTACCCCTGGAACACTTTGCGAGATAATAAAGTCAAAATCTAAAATGTATGCCTCAGCTCAACCAAACAAATCCCACTCTACTGATGCTAACACTGTATCAGCCATAGCAAGTACAGGGCATGCCTCTAGTTTGCCGGATCATAAAGATAAGGAAGTTCAAAGTCTTGTAGCTTTCAATAATGATGTAGCAATACTTGAACTTCCTGCGACTTCTGTAATACCTTTTGCAACTCAGGAACATGAAATGCCTGTACACATACCAGACCCTGAAGCCACCAAACTGCCAAACATCTCTACTTCTGCATGTCAGGAACTTCAAATGCCTGTACATGTTCATGCTGCAGAAGCCACCCAGCTTCCAAACATCTCTCTCCAACCAGGAGGTTCAGAACACGGCCTACAGGATATTGCTAATGCTTCCAGTTCAAAAAAGAGGCGGAAGAATAAGAAGAAGGCTAATAAGAAGTCACGTTTGGAAGCTCCGTTACCGCAGGCAGTAATTCCTTGTTCAGTTGCACAGTGA 1173 0.4399 MIPFISLSLASLGTVSDSEALMEPLQVKVDGFAMNFPQIQFTHASTSSVPPPAPARLTERLMHKNRLQEFALRSSMALPVYQTSNEGLPHAPRFRSTVWVDEMSYTSPNTFSQRKAAEQDVARLALENLMKRIKDEEYPLVYESTLFLSKSILNEFATKLSVERPTYDTIQLEGLLPHFQSYIVFNGTKYTGDTARNKKEAEQLAARAAIRSILGDSTPGTLCEIIKSKSKMYASAQPNKSHSTDANTVSAIASTGHASSLPDHKDKEVQSLVAFNNDVAILELPATSVIPFATQEHEMPVHIPDPEATKLPNISTSACQELQMPVHVHAAEATQLPNISLQPGGSEHGLQDIANASSSKKRRKNKKKANKKSRLEAPLPQAVIPCSVAQ* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0744 390 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 148 215 IPR014720 -
Aev03g0744 390 SMART DRBM_3 149 214 IPR014720 -
Aev03g0744 390 SMART DRBM_3 63 130 IPR014720 -
Aev03g0744 390 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 62 131 IPR014720 -
Aev03g0744 390 PANTHER RIBONUCLEASE III 49 370 IPR011907 GO:0003723|GO:0004525|GO:0006364
Aev03g0744 390 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 49 370 - -
Aev03g0744 390 Gene3D - 60 129 - -
Aev03g0744 390 Pfam Double-stranded RNA binding motif 149 211 IPR014720 -
Aev03g0744 390 Pfam Double-stranded RNA binding motif 64 129 IPR014720 -
Aev03g0744 390 MobiDBLite consensus disorder prediction 338 356 - -
Aev03g0744 390 SUPERFAMILY dsRNA-binding domain-like 150 219 - -
Aev03g0744 390 Gene3D - 133 217 - -
Aev03g0744 390 SUPERFAMILY dsRNA-binding domain-like 63 129 - -
Aev03g0744 390 MobiDBLite consensus disorder prediction 338 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0744 Aev-Chr3 5752019 5756302 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0744 - - aip:107631266 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2316 07 23988145 23991147 Aev03g0744 03 5752019 5756302 PCT