Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0743 ATGGCCACAACCACCCGAAAGAGACCATACCCATACGCCGACGACCGCCGTTCCCCTCCACCGCCATCAACCTCAGACCCCCATACCCAAAACCCTCCATCCTCTTCATTCCCCTCCTACCTCGACGCCCCTTCCCTCTCCCCAACCGTCAAATCCCTCTGCCACATCATCGCTACCACCCCTTCCCACTCCGTCGAGCAAGCCCTCCACAACTCCTCCCTCTCCATCGCCCGCTCCGACGTCGAGCAGGTCCTCAAGCTCTCATACTCCTTCCCCGGCCAAGCTGTCAAGTTTTTCCGATGGTCCGGCCACCACCTCTCCGATGACCACTCCCCTTACTCGTGGAACCTCGTCGTCGACATCCTCGGCAAGAACCGCTTCTTCGACGCCATGTGGGATGCAATCAAGTCCATGAAGAAGGAAGGTCTTCTCTCCCTCGCCACATTCGCATCAGTCTTCAGCAGCTACGTCGCCGCCGGAAGGATCCGCGACGCCGTCATGACCTTCGAGGTCATGGGCAACTACGGCTGCGTAAACGACGTCTTAGCGCTGAACTCTCTCCTCTCCGCCGTTTGCCGCGACGGCAGAACCCTTGACGCCAACGAGTTCTTGCAGGCTGCAAAGAAGCTGGTTCGCCCCGACGCAGATACCTACGCAATTCTGATGGAAGGGTGGGAGAGGGAAGGGAAAGTGAACAATGCTAAGGAGACTTTCGCGGAGATGGTGATTGAGATTGGTTGGGACCCTGCCAATGTTTCTGCTTATGATTCTCTCTTGTGTACTTTGATTAAAGGGGAAGATGGTGTTAGAGAAGCTGTTAAGTTCTTCGATTCGATGAGGGATCGTAGGTGTTACCCTGGGATTAGGTTTTTCAATGTTGCCTTGGAAGAGTGTGTGAAGAATCATGACCTTAGGACTGCTGAGTTTTTCTGGGAGGTGATGTTGGGGAAGGTTGGGTTGAAGTCTACTACTCAGATGTATAATTCCATGATTGCTTTGTATTGTTATCACAATGATACCGATGTTGCGAGGAGGTTAATGGATGAAATGGTTTATGAAGGGGCTTTCCCTGATATGTTTACTTATAACTTACTGTTTAGGTTCTTGATCAAGGGGAGGAAGTTGAGGGAAGCCGGGGTGGTGTTCGCAGAGATGGTGAAGAATGAGTGTGTGCCGGATAAGCCTAACTGTGATGCGGCGGTTAGGGTTTATGTCGATTGTGGGGATGCTTTTATGGCCATGAAGGTTTGGAAATGCATGGTGGAGAATTACCAGGAGGACTTGGAGGATACCGCGAATTTGCTTGTTGTGGGGCTTCGCGAACTGAATAGGCTCCCGGAAGCTGTTAAGTATGCAGAGGATATGATTGCAAGGAGAATCAAGTTAACCTCTTCCACATTGTCTAAGCTGAAACAGACCCTCGTCAAAGAGAGAAAAGAGTTTGTGTATGAAGAACTTTTGAGAAAGTGGAAATCTCATTAA 1482 0.5101 MATTTRKRPYPYADDRRSPPPPSTSDPHTQNPPSSSFPSYLDAPSLSPTVKSLCHIIATTPSHSVEQALHNSSLSIARSDVEQVLKLSYSFPGQAVKFFRWSGHHLSDDHSPYSWNLVVDILGKNRFFDAMWDAIKSMKKEGLLSLATFASVFSSYVAAGRIRDAVMTFEVMGNYGCVNDVLALNSLLSAVCRDGRTLDANEFLQAAKKLVRPDADTYAILMEGWEREGKVNNAKETFAEMVIEIGWDPANVSAYDSLLCTLIKGEDGVREAVKFFDSMRDRRCYPGIRFFNVALEECVKNHDLRTAEFFWEVMLGKVGLKSTTQMYNSMIALYCYHNDTDVARRLMDEMVYEGAFPDMFTYNLLFRFLIKGRKLREAGVVFAEMVKNECVPDKPNCDAAVRVYVDCGDAFMAMKVWKCMVENYQEDLEDTANLLVVGLRELNRLPEAVKYAEDMIARRIKLTSSTLSKLKQTLVKERKEFVYEELLRKWKSH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0743 493 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Aev03g0743 493 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 251 286 IPR002885 -
Aev03g0743 493 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 22 492 - -
Aev03g0743 493 TIGRFAM PPR: pentatricopeptide repeat domain 148 180 IPR002885 -
Aev03g0743 493 TIGRFAM PPR: pentatricopeptide repeat domain 113 143 IPR002885 -
Aev03g0743 493 TIGRFAM PPR: pentatricopeptide repeat domain 360 393 IPR002885 -
Aev03g0743 493 TIGRFAM PPR: pentatricopeptide repeat domain 326 355 IPR002885 -
Aev03g0743 493 Gene3D Tetratricopeptide repeat domain 58 195 IPR011990 GO:0005515
Aev03g0743 493 Gene3D Tetratricopeptide repeat domain 196 308 IPR011990 GO:0005515
Aev03g0743 493 Pfam PPR repeat family 326 368 IPR002885 -
Aev03g0743 493 SUPERFAMILY TPR-like 156 277 IPR011990 GO:0005515
Aev03g0743 493 Gene3D Tetratricopeptide repeat domain 317 493 IPR011990 GO:0005515
Aev03g0743 493 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 214 249 IPR002885 -
Aev03g0743 493 MobiDBLite consensus disorder prediction 1 41 - -
Aev03g0743 493 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Aev03g0743 493 PANTHER OS02G0711100 PROTEIN 22 492 - -
Aev03g0743 493 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 111 145 IPR002885 -
Aev03g0743 493 Pfam PPR repeat 148 177 IPR002885 -
Aev03g0743 493 Pfam PPR repeat 113 143 IPR002885 -
Aev03g0743 493 Pfam PPR repeat 217 242 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0743 Aev-Chr3 5745898 5747676 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0743 148 491 Glycosyltransferase AT1G05670 23.988 6.74e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0743 - - aip:107633752 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0743 03 5745898 5747676 Aev03g0743 03 5745898 5747676 ECH