LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g0722	ATGATGGAGGAGAACAACAACGAAGAACAACAAGAGAAGCGATTAGCGCAGAGAATCGCCGCGATTCTCGACGAGGCACGAGCCTCACTCGCCACGCACAACCGCAAGCTCAAGGAGCTCTCTCTCCTCCGATCCAAATCCCAATCCCTTTCCCTCTTCTTCTCCGCCTTCTCCAGAGTCCTCATCCCACTTTTCAACGTCCAGAGGCGCCTCCCCGCCGCCGAACGCGCCGTCGTGTTCGCCTCCGCCTTCGCCGCTGCTCACTCCGACGAGTTCCTCGAACTCTTCCTCAGGTTTCTCCTCGCTGCTGCCGCCTCCGCCAACAAGACTGCCAGGTTCCGTGCCTGCCAGATCGTCTCCGAGATAATACTGAGGCTACCGGATGATGCAGAAGTGAGCAATGACGTTTGGGATGAGGTGATAGAGTGCATGAAGTTGAGGGTAAGGGACAAGATCCCTATTGTGCGTACATTTGCCGTTAGGGCACTTTCTCGCTTTGTTAATGACACTCAGAACAGTGACATCCTTGATTTGTTCCTTGAAAACCTTCCCTTGGAGCAAAATGCGGACGTTCGCAAGATGATTGTGTTATCTTTGCCTCCTTCTAGTGCAACCTCTCAAGTTATCGTTGACTGTACCTTGGATGTCAGCGAATCTGTGCGTAAAGTAGCATACTGTGTTCTAGCTAATAAATTTCCCCTTCAAAGCTTGAGCATTAAGCTCAGGACAGTAATTCTTCGGAGAGGACTTGCTGATCGATCTGTTGCTGTCTCAAAGGAATGTTTCAAACTACTGAAAGACGAATGGCTTATAAAGTCTTGTAACAATGATCCTTTAGAACTACTCAAGTATCTTGATGTTGAAACCTATGAATCAGTTAGTGAGTCCGTCATGGAGGCGCTTCTAAAAGCTGATTTAGTCAAACTACAGAATGGTGCGAGTATCCAGCAGTATATATCATCAAATGGTGACTCGGCAGAAGGGGACTCAGTACATTGCTCACCTAGCATTCAGCTGATAGAAGCTGAGGCTGCTCTGTTTTGGAGAACTGTATGCAAGCATTTGCAGTCAGAAGCGCATGCCAAAGGCTCTGATGCTGCAGCCACAATGGGCACTGAAGCAGAAGTATATGCAGCTGAAGCATCTGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGTTACTGTTGATGATTATATAGAGTTGGTCAGAGCTCATATCAATGCTGGATTAAACCATCGCTTTGCATGCCGGCAGCTACTTTTGCTCGGTACCATGTTCGATTTTTCTGATGTTACAAATAGAAAGGTTGCTGGTGCATTTCTGCGGGAGCTGATGTGCAAGCCTCCTGAGCACGAGGTTGATAATGAAGGGAATGTGGTTATCATTGGGGATGGATTAAGTTTCGGTGGAGACAATGATTGGGCAGAAGCTGTAGCCAGGTTGGCAATGAAAGTCCATGCTGCTCCCGGTGAATTTGAAGAAGTAGTTATTGCAATCATAGAAGGACTAGCTCAACCTTGTAGGGAGAGAACAGCAGATTATGTGCAGTGGATACACAGCCTTTCTCTTACTGGCCTTTTGCTGAAAAAAGCAAAGTCAATGCGCTTGCTTCAAGGCAAGGCTATTGAACCAGAGGAGCTACTCCAATCTTTACTGCTCCCAGGGGCCAAACATGCTCACTTGGAGGTTCAAAGGATTGCTGTCAGATGCCTTGGCCTTTTCGGGCTTCTGGAGAGGAAACCAAGTGCAGAACTTTTGAAACAATTGAGGATTTCATACATCAAAGGGCCACATCCAATTAGTATAGAAGCCTGTAAAGCGTTGGTTGATCTTGAGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTGTTAAAGCATGACTTACCCTGTGGTGAAAAGAAGAGTTTCAGTCCCGTAAACTTTTCTGATTCCGAAGGGAATTTAGAAGTCGGAACGCTTGATCTCCTATATGGTGGCTTTGAAAACGATGACTGGGATAATCCTGTAACTAGCAATGAAGATGAGTGTGTTCATGCTGTTCTTGGAGAGGGTTTTGCGAAAATTCTTCTCCTAAGTGATAACTATCCAAGCATACCCGCTTCTTTGCATCCTTTGATTTTATCCAAGCTCATTTACTTGTACTTCAGTGACATGTCCGAACACCTGCAGAGGTTGAAGCAATGCTTATCTGTGTTTTTTGAGCACTACCCATGTCTCTCTGCCAATCATAAGAGTTGCATATCCAAGGCATTCATTCCCGTAATGCGTTCGATGTGGCCTGGAATTTTTGGCAACTCCAAAGGTTCTCCTTTTATGGTGTCGCAGATGCGTAAGCGTGCTGTTCAAGCCTCACGTTTTATGCTGCAGATGGTGCAGATTCCTTTATACGTCAAAGAGACTCAAGCAGAGAGTGAAGATGCTAGTACAGAAAATCCACAAGTTGTAGATAGTTGTGCAGAAGTTCCATTTGAGTGCGGTGAGGAGGGGCTTGCACTACGTATAGCTATTGAGGCGGCAAGCTTTCCCTCGAAGAAGACAGCTGCTGAGAAGTCATATGTGTCGGCATTATGTAGAACACTTGTTTTGCTTCATTTTCGGTTATCAGAACAAGGGCCAATAAAATTGATGAGGAGGCTTTTATGTCGCCTGGTTGAATGTGTATCTGCAGAGAAGGATCTTGTAAAAGAATTGAAGCGCATGGCTGAACATATCATGACTGTAGATAAACAGCCAGATCAGGAATTGTTGCAAGATGAAGTTAATCTCATTTTGGGGAAATTGGAAATTGACTTCAACCTGGATTTGGATGGTTCTGCTGCAATGCCACAAACACCAGCTGCACAACCAACTAGACATGGTGCACGTTCTAGGAGAAGGGTAAGGGTTGAGGACAATGATTCTGATGATAGTTCTGAAGAAGCTTCACCTGCTTCTGTGGTGCCTAGCACCAATCATACCCTACGAACTCGCTCGCAGAGAGAGAGCAAAACTGCAGCATTGAGTAAGATGTCTAACATCAGATCACGGAAAATTGATGAAATTGAAGAGGATGAGGAGGAAGAAGAAGAAGAAGACCCTTATGATAGATTCTGTACAGCAGAGCTCATCAATAGTTCAGCTTGCATTTGCTCACTCGCCATAAGTGGGATTGCTGGGAGAAGGGTGTTAAAGCTAGTCATGGGTTCTTTTAGTGTAATGGGCTTGGGCTCGATGGCATATTGGCAAAGAGGTTGTCGGCTTTTGGTAATGGATGCTTTATGGGGTTTTGGTGGCTATGCAAGAGTGGCGGCCGATAACAAAGTAGAAGCACCAGGAGCAGTGGCTACCAGCAGCGAAGCAGAACGAGGCCTCCTGGAGCAGTGTGCAATCGACAATGAACCAGAACCGGAGCAGCGGGTCGCGATCCTCACGGATGCGCTAGGTGATGAGCCAGGAAGGGAGGGAGAGCCGGAGAGGGAGGGAGCCGACGAGGCCGAGAAGGAGAAGGAGGGTTAG	3498	0.4657	MMEENNNEEQQEKRLAQRIAAILDEARASLATHNRKLKELSLLRSKSQSLSLFFSAFSRVLIPLFNVQRRLPAAERAVVFASAFAAAHSDEFLELFLRFLLAAAASANKTARFRACQIVSEIILRLPDDAEVSNDVWDEVIECMKLRVRDKIPIVRTFAVRALSRFVNDTQNSDILDLFLENLPLEQNADVRKMIVLSLPPSSATSQVIVDCTLDVSESVRKVAYCVLANKFPLQSLSIKLRTVILRRGLADRSVAVSKECFKLLKDEWLIKSCNNDPLELLKYLDVETYESVSESVMEALLKADLVKLQNGASIQQYISSNGDSAEGDSVHCSPSIQLIEAEAALFWRTVCKHLQSEAHAKGSDAAATMGTEAEVYAAEASDKNDLLEKILPVTVDDYIELVRAHINAGLNHRFACRQLLLLGTMFDFSDVTNRKVAGAFLRELMCKPPEHEVDNEGNVVIIGDGLSFGGDNDWAEAVARLAMKVHAAPGEFEEVVIAIIEGLAQPCRERTADYVQWIHSLSLTGLLLKKAKSMRLLQGKAIEPEELLQSLLLPGAKHAHLEVQRIAVRCLGLFGLLERKPSAELLKQLRISYIKGPHPISIEACKALVDLEMWHGPQEVDRVLKHDLPCGEKKSFSPVNFSDSEGNLEVGTLDLLYGGFENDDWDNPVTSNEDECVHAVLGEGFAKILLLSDNYPSIPASLHPLILSKLIYLYFSDMSEHLQRLKQCLSVFFEHYPCLSANHKSCISKAFIPVMRSMWPGIFGNSKGSPFMVSQMRKRAVQASRFMLQMVQIPLYVKETQAESEDASTENPQVVDSCAEVPFECGEEGLALRIAIEAASFPSKKTAAEKSYVSALCRTLVLLHFRLSEQGPIKLMRRLLCRLVECVSAEKDLVKELKRMAEHIMTVDKQPDQELLQDEVNLILGKLEIDFNLDLDGSAAMPQTPAAQPTRHGARSRRRVRVEDNDSDDSSEEASPASVVPSTNHTLRTRSQRESKTAALSKMSNIRSRKIDEIEEDEEEEEEEDPYDRFCTAELINSSACICSLAISGIAGRRVLKLVMGSFSVMGLGSMAYWQRGCRLLVMDALWGFGGYARVAADNKVEAPGAVATSSEAERGLLEQCAIDNEPEPEQRVAILTDALGDEPGREGEPEREGADEAEKEKEG*	1166

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g0722	1165	MobiDBLite	consensus disorder prediction	1008	1027	-	-
	Aev03g0722	1165	Pfam	Nuclear condensing complex subunits, C-term domain	521	866	IPR025977	-
	Aev03g0722	1165	MobiDBLite	consensus disorder prediction	939	1003	-	-
	Aev03g0722	1165	Gene3D	-	65	244	IPR011989	-
	Aev03g0722	1165	PANTHER	CONDENSIN COMPLEX SUBUNIT 3	9	1024	-	-
	Aev03g0722	1165	SUPERFAMILY	ARM repeat	60	741	IPR016024	-
	Aev03g0722	1165	MobiDBLite	consensus disorder prediction	1138	1165	-	-
	Aev03g0722	1165	PANTHER	CONDENSIN COMPLEX SUBUNIT 3-RELATED	9	1024	IPR027165	GO:0000796\|GO:0007076
	Aev03g0722	1165	Coils	Coil	5	43	-	-
	Aev03g0722	1165	MobiDBLite	consensus disorder prediction	1143	1165	-	-
	Aev03g0722	1165	MobiDBLite	consensus disorder prediction	973	1003	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g0722	K06678		-	gmx:100817677	1536.93

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev03g0722	03	5496471	5511994	Aev03g0722	03	5496471	5511994	ECH