Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0582 ATGGTAATAGTAGCATTATCATCACCTTCGCCCCTTCCGGGGAGAAACCTCTTCTCCTCCCTCCCCTCCACGCCACCGCCCTACGACCCTTCCGCCGCCGTCACCCCAACTCCTCAACCACCCATCCCCATCCCCAAATACCCACCACCCCGCAAATCCCAGCACCATAATCCCAAACCCACCAACAACTCTAACCCCGCACTCAAGCACCACAACCGCTCCAAATACTACAAGCCCATCAGCCGCGACGGCCCCATCTCCTCCGACGGCGACCGCTCCGTCGTAATCGGAGAATCTGGCGTCTCCTACCTCCTCCCCGGCGCCCCCTTCGAGTTCCAGTTCAGCTACTCCGAGACCCCCAATGTGAAGCCCATCGCCATCAGGGAGCCGGCGTTCTTGCCATTCGCCCCGCCCACGATGCCTAGGCCGTGGACGGGGAAGGCGCCGTTGAAGAGCAAGAAGAGGAAGGAGAAGAAGGTGAAGCTTTTGGAGTCGATGAGGCCTCTGCCTCCAGGGGTGAATGGGGTGAAGCAGAAGGAGATGGCGAAGCCCTTGAAGCTTGGTACTTACTCCACTGATGGGAAGACGAGGGAGGAGATATTGGGGGAGCCATTGAAGAAGTCGGAGATAAGGATGCTTGTTAAGCCCATGATATCGGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACACATAACATGTTGGAGTTGATACATTCGCATTGGAGGCGTAGCCCTGTATGTAAAATTCGGTGTAAAGGTGTTCCAACTGTAGATATGGACAATGTTTGTCGTCATATTGAGGATAAAACAGGGGGAAAAATAATTCTTCGGGTTGGTGGTGTTGTTTATCTTTTCTGTGGAAGAAATTACAACTATAGTACTCGTCCACAGTATCCGGTGATGCTCTGGAAGCCTGCGGCTCCGGTTTACCCTAAACTTATACAAGATGCTCCAGGAGGATTAACAAAAGTTGAAGCTGACGAACTACGTAGGAAAGGGAAAAACCTTCTGCCAATATGTAAATTAGCCAAAAATGGAGTCTATGTTACCCTGGTAAAGAATGTCAGAGATGCTTTTGAAGGAAGTCATTTGGTGAAAATTGACTGCAAGGGACTGGATCCTAGTGACTACAAGAAAATAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTGTTGTCTTTTGATAATGAACAGATATTAATGTGGAGGGGCAACGATTGGAAATCAAGGTACCCGCAACTTCCTCCACGTTATAGTCCCAAAAAAGGTGTCATTATAGAGAATTTGGACAATACAGGTGAGACCAATGATGATCAATCCAGCATGTTGAACACGAGCCCGAAAATGTTTTCTCTGTGGAAGCGCGCAATCGACACAAACAAAGCTTTGGTCCTGGACGAGTATAATCTTGGCCCTGATGCCCTATTGAAGAAGCTTGAAGAGCTTGTGTATTGA 1464 0.4939 MVIVALSSPSPLPGRNLFSSLPSTPPPYDPSAAVTPTPQPPIPIPKYPPPRKSQHHNPKPTNNSNPALKHHNRSKYYKPISRDGPISSDGDRSVVIGESGVSYLLPGAPFEFQFSYSETPNVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSKKRKEKKVKLLESMRPLPPGVNGVKQKEMAKPLKLGTYSTDGKTREEILGEPLKKSEIRMLVKPMISDNRQVNLGRDGLTHNMLELIHSHWRRSPVCKIRCKGVPTVDMDNVCRHIEDKTGGKIILRVGGVVYLFCGRNYNYSTRPQYPVMLWKPAAPVYPKLIQDAPGGLTKVEADELRRKGKNLLPICKLAKNGVYVTLVKNVRDAFEGSHLVKIDCKGLDPSDYKKIGAKLKDLVPCVLLSFDNEQILMWRGNDWKSRYPQLPPRYSPKKGVIIENLDNTGETNDDQSSMLNTSPKMFSLWKRAIDTNKALVLDEYNLGPDALLKKLEELVY* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0582 487 MobiDBLite consensus disorder prediction 1 72 - -
Aev03g0582 487 SMART CRS1_YhbY_2 323 406 IPR001890 GO:0003723
Aev03g0582 487 SMART CRS1_YhbY_2 205 288 IPR001890 GO:0003723
Aev03g0582 487 Pfam CRS1 / YhbY (CRM) domain 205 287 IPR001890 GO:0003723
Aev03g0582 487 Pfam CRS1 / YhbY (CRM) domain 323 406 IPR001890 GO:0003723
Aev03g0582 487 ProSiteProfiles CRM domain profile. 321 417 IPR001890 GO:0003723
Aev03g0582 487 Gene3D - 323 418 IPR035920 -
Aev03g0582 487 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 10 485 - -
Aev03g0582 487 MobiDBLite consensus disorder prediction 56 70 - -
Aev03g0582 487 Gene3D - 204 300 IPR035920 -
Aev03g0582 487 ProSiteProfiles CRM domain profile. 203 299 IPR001890 GO:0003723
Aev03g0582 487 SUPERFAMILY YhbY-like 323 414 IPR035920 -
Aev03g0582 487 MobiDBLite consensus disorder prediction 23 55 - -
Aev03g0582 487 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 10 485 IPR044599 GO:0000373
Aev03g0582 487 SUPERFAMILY YhbY-like 204 296 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0582 Aev-Chr3 4264988 4268474 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0582 - - gmx:100801953 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0582 03 4264988 4268474 Aev03g0582 03 4264988 4268474 ECH