Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0578 ATGTTGAGGGGAAACAGTGGTAGTCCTGTTCTTCCTGTTTTCTTGGATGAAACTCAATTTCAGCATCAATCTAATGCAGCAAATCAATTGCAGTTGTTTGGAAATATGCAAGCTGGATGCAGTGTTGACCCTGCTAATTATTTTGGTAATGAGCATGTTAACTCCATGATTCAATCTATCAAACGAAGCAGAGAAATGGAGAATATATCTAAGAAGCAAAAGCTTCAGATTTCTTTAAATTACAATGCCGGTCAGGATGAAGTTGATCGATCACCAAACATGCCGAATCCAAACCCTGTGTCAACAGGATTGAGGCTTTCTTATGATGATGATGAGCGCAACTCCTCTGTTACTTCTGCTAGCGGCAGCATGAATGCCGCACCTTCGATGATATTAACACTTGGTGACAGTATCAGAACTGAGCTTGATAGGCAGCAAGAAGAGCTGGACCAGTTTATTAAGCTTCAGAGGGATCAATTGGCAAAAGAAGTGAGAGATATGAAACAGAAGCATGTGGCTTCTGTCCTTTCTGCCATTGAAAGAAGTGTTAGCAAGAAGCTAAGGGAAAAAGATTTGGAGATAGAGAGCATCAACCAGAGAAATAGGGAGCTAGCAGAGAGAATAAAAGAGGCATCTATTGGAGTGCATGACTGGCATCACAGAGCAGTGTATAATGAACAAATTGTCAGTGCATTAAGGAAAAATATACAAAAAGTAATTTCACAAGGAAAGGAAGGTTTTGGAGACAGTGAAGTTGATGATTCTGCTTCATGCAATCAAGGTGCACACATGAAATCTACTTTGAAGAAACACCAAGGCATAGAGAACTTGACTTGCAGAACATGCAAGATCAAGGAGGTTTCAGTGTTGTTGATGCCTTGCAGACACCTGTGCTTGTGCCATCTCTGCGATATATTTATCGATGTTTGTCCTGTATGCCAACTGATAAAAACTACAAGTTTCCAAGTGCGTTTGTGTTAA 981 0.4037 MLRGNSGSPVLPVFLDETQFQHQSNAANQLQLFGNMQAGCSVDPANYFGNEHVNSMIQSIKRSREMENISKKQKLQISLNYNAGQDEVDRSPNMPNPNPVSTGLRLSYDDDERNSSVTSASGSMNAAPSMILTLGDSIRTELDRQQEELDQFIKLQRDQLAKEVRDMKQKHVASVLSAIERSVSKKLREKDLEIESINQRNRELAERIKEASIGVHDWHHRAVYNEQIVSALRKNIQKVISQGKEGFGDSEVDDSASCNQGAHMKSTLKKHQGIENLTCRTCKIKEVSVLLMPCRHLCLCHLCDIFIDVCPVCQLIKTTSFQVRLC* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0578 326 Coils Coil 187 214 - -
Aev03g0578 326 MobiDBLite consensus disorder prediction 85 103 - -
Aev03g0578 326 Pfam Zinc finger, C3HC4 type (RING finger) 276 314 - -
Aev03g0578 326 PIRSF SBP1_RNase_bind 1 326 IPR017066 -
Aev03g0578 326 ProSiteProfiles Zinc finger RING-type profile. 279 314 IPR001841 -
Aev03g0578 326 Gene3D - 101 158 - -
Aev03g0578 326 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 4 325 IPR017066 -
Aev03g0578 326 Gene3D - 288 317 - -
Aev03g0578 326 Gene3D Death Domain, Fas 159 287 IPR011029 -
Aev03g0578 326 MobiDBLite consensus disorder prediction 85 123 - -
Aev03g0578 326 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 4 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0578 Aev-Chr3 4224344 4226220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0578 279 314 Miscellaneous Gene Families AT2G21380 38.889 3.92e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0578 K19042 - gmx:100790534 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0578 03 4224344 4226220 Aev03g0578 03 4224344 4226220 ECH