LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g0559	ATGGCGAGAACATTAAAAAAGTGCATGATGCTTTGCTGTACCAGCCAGGTTGCATCGAAGGAAGACATGGCAGGAGAGTCGTATGAGGATGCCATTGCAGCGCTCACCAACCTTCTCAGCGAGAAAGCTGACCTCGGGGGCGTCGCCGCCGCAAAGATCAAGCAGCTCACGGCGGAGCTTGAGGCCGAGGCAATCAACCCGGATGACAGGATCCGAACCGGGTTTGACCACTTCAAGAACCAGAAATTTAAGACAAATCTGGATCTGTTTGGCGAACTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTGTTTGCTTGCTCAGACTCAAGAGTTTGCCCATCTCATGTTCTGAACTTCCAACCTGGTGAAGCCTTTGTGGTCCGAAACATCGCCAACATGGTTCCACCTTATGACAAGACCAAGTATTCAGGAACAGGGGCAGCCATTGAATATGCAGTCCTACATTTAAAGGTGGAGAATATTTTGGTGATTGGACACAGTTGCTGTGGAGGCATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACTTCAAGTGACTTCATAGAGCAATGGGTCCAAATTTGCAATCCTGCAAAGTACAAGGTTAAAGCAGGAGCTGGCGACTCAGGTTTGCCAGAACAGTGTACCAGTTGCGAGAAGGAAGCGGTGAATGTATCACTAGGGAACCTATTGACATATCCATTTGTAAGAGATGCGGTTGTGAATAAAAAGCTGGCTTTGAAGGGTGCACATTACGATTTTGTGAATGGCAGCTTTGACCTTTGGGATCTTGACTTCAAAATCTCTGCCTCTGTACCCCTTTAA	828	0.4795	MARTLKKCMMLCCTSQVASKEDMAGESYEDAIAALTNLLSEKADLGGVAAAKIKQLTAELEAEAINPDDRIRTGFDHFKNQKFKTNLDLFGELAKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPPYDKTKYSGTGAAIEYAVLHLKVENILVIGHSCCGGIKGLMSIPDDGTTSSDFIEQWVQICNPAKYKVKAGAGDSGLPEQCTSCEKEAVNVSLGNLLTYPFVRDAVVNKKLALKGAHYDFVNGSFDLWDLDFKISASVPL*	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g0559	275	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 1.	106	113	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Aev03g0559	275	SUPERFAMILY	beta-carbonic anhydrase, cab	69	269	IPR036874	GO:0004089\|GO:0008270
	Aev03g0559	275	ProSitePatterns	Prokaryotic-type carbonic anhydrases signature 2.	150	170	IPR015892	GO:0004089\|GO:0008270\|GO:0015976
	Aev03g0559	275	SMART	Pro_CA_2	94	264	IPR001765	GO:0004089\|GO:0008270
	Aev03g0559	275	Pfam	Carbonic anhydrase	102	259	IPR001765	GO:0004089\|GO:0008270
	Aev03g0559	275	PANTHER	CARBONIC ANHYDRASE	23	273	IPR001765	GO:0004089\|GO:0008270
	Aev03g0559	275	CDD	beta_CA_cladeB	74	263	IPR045066	GO:0004089\|GO:0008270
	Aev03g0559	275	Gene3D	Carbonic anhydrase	60	275	IPR036874	GO:0004089\|GO:0008270
	Aev03g0559	275	PANTHER	CARBONIC ANHYDRASE	23	273	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g0559	Aev-Chr3	4102196	4111282	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g0559	K01673		-	gmx:100803945	462.611

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev03g0559	03	4102196	4111282	Aev03g0559	03	4102196	4111282	ECH