Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0550 ATGGAACACGAATCAAAATCACACAAGAAGCGCCCTCTCGAACTTAACTGGGACACCCTTCTCGGCAGTGACGCACCGCCGCCTGAGCTCCTCGTCAAGCCCATGGCCTCCGATCACTCCTCATCCGCCGCCGCCGCCGGTGCCGAAAACCTTGAGTCCATCTCCGAACAGAAGCTTCTGGAATCCATTGCCAGCAAGAAGAAGACCCTCGAGTCCACCGGTCGTAACTTGAAGGACGGTGGCGCAAAGCTTGTCACAACCATCAAGAGCTACGAGGACGAGCTTGCTCGCCGCAAAAGGAAGCCTATCGTGGAGGAGGTTATTGTTGATAATGATGATGATGATAAGCCGAGACATCCTACAGGGTCAAGTGATGTTGGCATGTGTAGTGACTTGAGAAAAGAGAATGTGTCATCTCAAGCGCCAACGCAATCCTCATTTGCATCTCGTTTTGTTCAGAAAATGGAAGTTGATACTGATTGTGCGAAAGTTGAAGCATTTGGAAAAGAGTTGTCACACTTTAAACACTGCAACAAGCAGGCAATACAAGACAATGGAGACTCAAAAGGGGGAGAGATGCTTCAATCTTCTTCTAGAAAATCGCAATTTCAATGCCCTAGCAATCTCTCCAAGCGTGGTAATTTTAAAGAAGATAGAAGCCGCAAAGCAACTTCCAGTTTCTCTCTGCAGAACTTTGGGAAAACGCTGTCAAGAAGCTTTGCAAAAGTGAAGGAACAGGAAATTCAGTCAGATGGCTCAAGGTCCCGGAAGGGTCAGCCCATTGTTCTTGATGATGATGACGATGACAATGATGATGAACCTTGTGTCCTGGAGAAGGCAGAGAATGAAAACAGATTTTCAGAATACATGAAAGACGCTAAGATCTATTATCCATCAAGAGATGATCCGGAGTGTGTTGAAATTTGTTACTCAGACATAGATTGCCTTGCTCCTGGAGGATATTTAACATCAACTATTATGAACTTTTACATACGATATTTGCAGCAGCAAGCATCTCTGACAAGTAAATCATTATCTGACTATCATTTTTTCAATACATATTTCTACAAGAAGCTTCAAGAGGCTCTTTCCTGTAAGCGAAGTGACAGAGAATCATTCTTTGTGAAGTTCAGAAGGTGGTGGAAGGGTGTAAATATGTTTCAGAAGGCCTATATTTTGATTCCAATACATGAGGATCTTCATTGGAGCTTGATCATAATATGTATCCCGGATAAAGAAGATGATTCGGGGCCAATCATACTTCATTTGGATTCTTTAAGTCTTCACTCTAGTAGATCACTATTTGATAACATTAAAAGCTATTTGGTAGAAGAACGGAACTATTTGGATCGAGAAGGTATGTCATCAGATGTTTCAATTGCAGACAGAATATGGAAGTGCCTTCCTCGTAGAATTGAAAGTCAAGTCATCTCGGTACCTCAACAGAAGAATGAGTATGATTGCGGTCTTTTTGTACTGTACTTCATTAAGCGTTTCATTGAAGAGGCGCCAGAAAGACTTAAAAAGAAGGACTTAGACAGACTGAAAAGGAAAGATTTAGACATGTTTGGCAGGCGATGGTTTAAACCAGAAGAGGCGTCCGGTCTGAGAACGAAAATCCGCAAATTGCTTGTAGCAGAACTCCAAAAATCAATCAGCGATAATTCTCTGCCAGAATCTTCTCCTTCCTCACCTGTCGGCACTGGGGCCGATTGTGTTGTGACCATGGAGGATTATTTTTGA 1743 0.4309 MEHESKSHKKRPLELNWDTLLGSDAPPPELLVKPMASDHSSSAAAAGAENLESISEQKLLESIASKKKTLESTGRNLKDGGAKLVTTIKSYEDELARRKRKPIVEEVIVDNDDDDKPRHPTGSSDVGMCSDLRKENVSSQAPTQSSFASRFVQKMEVDTDCAKVEAFGKELSHFKHCNKQAIQDNGDSKGGEMLQSSSRKSQFQCPSNLSKRGNFKEDRSRKATSSFSLQNFGKTLSRSFAKVKEQEIQSDGSRSRKGQPIVLDDDDDDNDDEPCVLEKAENENRFSEYMKDAKIYYPSRDDPECVEICYSDIDCLAPGGYLTSTIMNFYIRYLQQQASLTSKSLSDYHFFNTYFYKKLQEALSCKRSDRESFFVKFRRWWKGVNMFQKAYILIPIHEDLHWSLIIICIPDKEDDSGPIILHLDSLSLHSSRSLFDNIKSYLVEERNYLDREGMSSDVSIADRIWKCLPRRIESQVISVPQQKNEYDCGLFVLYFIKRFIEEAPERLKKKDLDRLKRKDLDMFGRRWFKPEEASGLRTKIRKLLVAELQKSISDNSLPESSPSSPVGTGADCVVTMEDYF* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0550 580 SUPERFAMILY Cysteine proteinases 294 545 IPR038765 -
Aev03g0550 580 MobiDBLite consensus disorder prediction 1 15 - -
Aev03g0550 580 Gene3D - 297 545 - -
Aev03g0550 580 ProSiteProfiles Ubiquitin-like protease family profile. 306 499 IPR003653 GO:0006508|GO:0008234
Aev03g0550 580 Pfam Ulp1 protease family, C-terminal catalytic domain 321 531 IPR003653 GO:0006508|GO:0008234
Aev03g0550 580 PANTHER UBIQUITIN-LIKE PROTEASE 4 49 562 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 107 121 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 182 222 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 183 211 - -
Aev03g0550 580 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 49 562 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 107 129 - -
Aev03g0550 580 Gene3D - 348 476 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 1 49 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 243 263 - -
Aev03g0550 580 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0550 Aev-Chr3 4033641 4040820 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0550 K16287 - gmx:100790705 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0550 03 4033641 4040820 Aev03g0550 03 4033641 4040820 ECH