Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0539 ATGGGTAAGCATTTTTTGCTTCTTCAGGGTCTAACTCTCTTGCTTCTGTTTGGGACCCTCTCAGTTTCAGCTGCACCATCAACTACTTCCCCTGCTAAAATTGTAAGTGGTTTACTCTCCAATGCTGTGCCAACTTTCACCAAGTGGGTGTGGTCACTCAAGGCAACCACCAAAACAGCAATTTCGAGTCGGTCGATGATGAAGTTTGAGAGTGGTTACAGTGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATGCTGTTGAGGTTTTGTCCAATGGGGAGCTTCTAATTCTGGATTCAGCTAACAGTAACATTTACAGGATTTCATCCTCACTTTCTTTGTATAGCAGGCCGAAGCTAGTGGCAGGATCTGCTGAAGGATATTCGGGACATGTTGATGGGAAGCTTAGGGAGGCTAGGATGAACCACCCAAAGGGGATAACTGTTGATGACCGAGGAAATATTTATGTTGCAGACACTACTAATATGGCAATTAGGAAAATCAGTGATTCAGGGGTCACAACAATTGCTGGCGGAAAATGGAGTCGTGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAGTTTTCTGATGACTTTGATGTGGTTTATGTTGGTAGTAGTTGTTCCCTCCTCATCATCGATAGAGGAAACCGAGCCATCAGAGAGATCCAACTCCACTTTGATGATTGTGCATATCAATATGGCAGTGGATTCCCACTTGGGATTGCAATGCTCGTTGGGGCTGGTTTCTTCGGTTATATGTTGGCATTATTGCAACGAAGGCTTGTTACAATTGTTGGATCACAGGATGCTCAGGTTCCAGTAATGTCTTCAATTTCTCCAAGTCCATATCAAAAGCCCATGAAATCTGTCAGGCCTCCTTTGATTCCATCTGAATTTGAACCTGAAAAGCAGGAAGAAAGTTTCTTTGGATCCCTTGGGAAGCTTCTTACCAATGCTGGTGCATCAATGGTGGAGATAATGGGAGGAGTGTTTCCTGGTTTCAGAAGAAAACCGCAGAGCTACCAGTTTCAAAGACAGCCATTGGTCCCTCAACCTCAGAAGCAAGCTTGGCCTGCGCAGGAAAGTTTCGTGATTCCTGATGGAGACGAACCTCCTTCTATCGACACAAGAACCCCAACCCCTCGAAAAACGTACCCTTTCATGTCAAAGGATGCCGAAAAAATTCAACAGTTGCGGCAAAGTAGAGCATTCTACAGTGGATGGGATGGAGATCTTCATCAGCAGCAGCAACAACGACAGCATCAACTACAGCAACAACAGCAACAGCAACTGCTGCAGCAGCAGCAACAACAGCAACAAAAACACCATCGTCATCAATACCAATCATCGATCCCTCACACTTACTATGAGCAGAGCCATGAGACGACAAATGAGATAGTGTTTGGTGCAGTGCAGGAACAGGAAGCTAAGAAGGAGTCTGTGGTAATCAAGCCGGTGAATTATGGGGACTCAATGTATGAGCATCACAATATTCGGTCTCGAATGAGTTTCATGGGTTATCCCCATAAGTACTAA 1557 0.4515 MGKHFLLLQGLTLLLLFGTLSVSAAPSTTSPAKIVSGLLSNAVPTFTKWVWSLKATTKTAISSRSMMKFESGYSVETVFDGSKLGIEPYAVEVLSNGELLILDSANSNIYRISSSLSLYSRPKLVAGSAEGYSGHVDGKLREARMNHPKGITVDDRGNIYVADTTNMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLIIDRGNRAIREIQLHFDDCAYQYGSGFPLGIAMLVGAGFFGYMLALLQRRLVTIVGSQDAQVPVMSSISPSPYQKPMKSVRPPLIPSEFEPEKQEESFFGSLGKLLTNAGASMVEIMGGVFPGFRRKPQSYQFQRQPLVPQPQKQAWPAQESFVIPDGDEPPSIDTRTPTPRKTYPFMSKDAEKIQQLRQSRAFYSGWDGDLHQQQQQRQHQLQQQQQQQLLQQQQQQQQKHHRHQYQSSIPHTYYEQSHETTNEIVFGAVQEQEAKKESVVIKPVNYGDSMYEHHNIRSRMSFMGYPHKY* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0539 518 Pfam NHL repeat 146 171 IPR001258 GO:0005515
Aev03g0539 518 PANTHER NHL REPEAT PROTEIN 439 518 - -
Aev03g0539 518 Gene3D - 38 230 IPR011042 -
Aev03g0539 518 PANTHER NHL REPEAT PROTEIN 1 435 - -
Aev03g0539 518 SUPERFAMILY NHL repeat 74 232 - -
Aev03g0539 518 PANTHER - 1 435 - -
Aev03g0539 518 PANTHER - 439 518 - -
Aev03g0539 518 MobiDBLite consensus disorder prediction 357 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0539 Aev-Chr3 3932506 3935508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0539 - - gmx:100781836 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0539 03 3932506 3935508 Aev03g0539 03 3932506 3935508 ECH