Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0468 ATGAGCTATTCGACAAAGATTGCAAAGCACCCAACAATTTTATTGGTAAAAGCACGCACCACACTGGAAGAGTTGAAGCAAATACACGCTCAATTGCTCGTCAATGGCGTCCTCAACAACGCTCACTTTCATGGTCAATTCGTTGTCACCATAGCCCTCCACAACCCATCTAACCTCAACTACTCCAACCACCTCCTCCACCGCCACCGCCACCACCACAATCTCGTCACACTCAACTCCATGATCAGGGCATACTCCAAGAGCCCCACCCCACAAAAAAGCTTCCTTTTTTACAACAAGATCCTTCACTCCCCTAACAACCTCTCCCCCGACAACTACACCTTCAACTTCATGGTCCGCACTTGCGCGCAGCTCCTCGTGCTCGAGGCTGGCACGTGCGTTCATGGGTCACTCGTAAAGCACGGGTTTGAGCACGACCCGCACGTGCAGACTGGGTTGATCTTCATGTACGCTGAATTGGGGTGTCTCGGTTCGTGCCAGAGAGTGTTCCGAGGGATTTGTAAGCCTGATTTGGTGTGCCAGACCGCTATGGTGCACGCTTGCGCCAAGTGTAGTGACGTTGACTTTGCAAGGAAGATGTTTGATGTAATGCCCCAAAGAGATCATATTGCTTGGAATGCAATGATTGCAGGGTATGCACAATGTGGAAGGTCGAGGGAGGCTCTGGAACTGTTTCACCTGATGCAAGTGGAGGGTGTGTTGCTCAATGAGGTGTCAATGGTTTTGGTTTTGTGTGTTTGTACCCAATTGGGGGCATTGGATCAGGGAAGATGGGCTCATGCGTATGTTGAGAGGAGCAAGATCAAGATGACGGTGTCACTTGGGACTGCACTCATAGATATGTATGCTAAATGTGGGGACATTGAAAAGGCCATGGAAGTGTTTTGGGGGATGGAGGAGAGGAATGTTTACACGTGGAGCAGTGCCATTGGTGGGTTGGCCATGAATGGCCTTGGCCATGAGAGTCTGCATCTTTTTGATAATATGAAAAAAGATGGAATAGTTCAGCCGAATGAAATCACATTCATTTCAGTGTTAAGAGGGTGCAGTGTGGTTGGACTAGTGGATGAAGGTAGAAAGCATTTTGAGTCAATGAAGAATTTGTATGGGATTGAGCCTCAAGTTGAGCACTATGGCTTAATGGTTGATTTGTATGGTCGATCAGGGCGTCTCGAGCAAGCTCTGAACTTCATCAATGCCATGCCTATGAAGCCTCATGCCGGTGCATGGAGCGCTTTACTTCATGCTTGCAGAATGCACAAAAACAAGGAGCTTGGTGAACTTGCACTGAAAAAGATTGTGGAACTAGAGGCCAAGAATGATGGTGCATATGTCCTTTTATCAAATATATATGCTGATCACAAGAATTGGGAAGGTGTTAGCAGTTTGAGGCAGACCATGAGGGCTAAAGGTGTGAAAAAGCTCCCTGGTTGTAGTGTCATAGAGGTTGATGGTGAAGTTCATGAGTTCATTGTTGGGGACAAGTCTCACCCAAGATATGATGAGATTGAATTGAAGCTAGAAGAGGTATCTAAGTGTCTGAGATTAGCAGGGTATGTAGCTGATACAAACCTTGTCCTCTTTGATATAGAAGAAGAGGAGAAAGAATGTGCTGTGAGTAGACATAGTGAGAAAGTAGCCATTGCATTTGGGTTAATTAGTTTGAGAGAAGGTGTTCCCATTAGGGTTGTTATGAACCTGAGGATTTGTTGGGATTGCCATGATGTAGCAAAAATGATATCCAAAATTTATGACAGAGATATTATTGTTAGAGACAGGAACAGGTTTCATCACTTTAAGGATGGTGAATGCTCTTGTAAAGATTATTGGTGA 1854 0.4569 MSYSTKIAKHPTILLVKARTTLEELKQIHAQLLVNGVLNNAHFHGQFVVTIALHNPSNLNYSNHLLHRHRHHHNLVTLNSMIRAYSKSPTPQKSFLFYNKILHSPNNLSPDNYTFNFMVRTCAQLLVLEAGTCVHGSLVKHGFEHDPHVQTGLIFMYAELGCLGSCQRVFRGICKPDLVCQTAMVHACAKCSDVDFARKMFDVMPQRDHIAWNAMIAGYAQCGRSREALELFHLMQVEGVLLNEVSMVLVLCVCTQLGALDQGRWAHAYVERSKIKMTVSLGTALIDMYAKCGDIEKAMEVFWGMEERNVYTWSSAIGGLAMNGLGHESLHLFDNMKKDGIVQPNEITFISVLRGCSVVGLVDEGRKHFESMKNLYGIEPQVEHYGLMVDLYGRSGRLEQALNFINAMPMKPHAGAWSALLHACRMHKNKELGELALKKIVELEAKNDGAYVLLSNIYADHKNWEGVSSLRQTMRAKGVKKLPGCSVIEVDGEVHEFIVGDKSHPRYDEIELKLEEVSKCLRLAGYVADTNLVLFDIEEEEKECAVSRHSEKVAIAFGLISLREGVPIRVVMNLRICWDCHDVAKMISKIYDRDIIVRDRNRFHHFKDGECSCKDYW* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0468 617 Gene3D Tetratricopeptide repeat domain 174 273 IPR011990 GO:0005515
Aev03g0468 617 Gene3D Tetratricopeptide repeat domain 285 504 IPR011990 GO:0005515
Aev03g0468 617 Gene3D Tetratricopeptide repeat domain 14 173 IPR011990 GO:0005515
Aev03g0468 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 208 242 IPR002885 -
Aev03g0468 617 Pfam DYW family of nucleic acid deaminases 525 617 IPR032867 GO:0008270
Aev03g0468 617 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 309 343 IPR002885 -
Aev03g0468 617 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 17 591 - -
Aev03g0468 617 Pfam PPR repeat family 308 356 IPR002885 -
Aev03g0468 617 Pfam E+ motif 494 519 IPR046849 -
Aev03g0468 617 TIGRFAM PPR: pentatricopeptide repeat domain 311 345 IPR002885 -
Aev03g0468 617 TIGRFAM PPR: pentatricopeptide repeat domain 283 310 IPR002885 -
Aev03g0468 617 TIGRFAM PPR: pentatricopeptide repeat domain 211 243 IPR002885 -
Aev03g0468 617 Pfam PPR repeat 384 409 IPR002885 -
Aev03g0468 617 Pfam PPR repeat 182 207 IPR002885 -
Aev03g0468 617 Pfam PPR repeat 211 240 IPR002885 -
Aev03g0468 617 PANTHER OS01G0715700 PROTEIN 17 591 - -
Aev03g0468 617 Pfam E motif 427 489 IPR046848 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0468 Aev-Chr3 3424160 3426013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0468 73 617 Glycoside Hydrolase AT3G49170 35.624 2.47e-111 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0468 - - gmx:100795404 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0468 03 3424160 3426013 Aev03g0468 03 3424160 3426013 ECH