LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev03g0428	ATGGTTAGTACCATATCATCCACTGCTAAAATCAGCCTCCATCAGTTGAAAACTTTCAACACTGATGACAACAAAAGTCACCTCCATGATGCCATTTTCTCTCCATACTTGAATGGTCAAACAAGCCAAAAACTCAACCCCTTTATCAGCAACAGAAGGGATCAACTTCACCATGGTGAAAAGAAGGAAGAAGATGGAGAAATTGGAGTGTTTGGTGCTGAAAAGTACTTCTATGAAGGGGAAGTAGAGGCCTCATCAGAAGCTGATTCCAACATAACTCCCACAAAGTTCTTGCATCAGAGAGACCACCAAATATCTCTTCAAACAAGACAGTACAAAGTTCAGTATGGAACACCAAGTGTACGCTCTGAATCAACTTGTAACAGCCAGAGTGCACTATTACACAGTGCTATGACTATGAGGAATTCCACAAGGAACAAGCAAAACAACAAGTCTCAGGCAAAGGGCTTCCTAGCAGGTCTTGGTCTCAAATGCTCATGTTCTGACAAGAATTCTGTTGATACCAGAGACCATGTAGGTGAAATCTATGATGTGTTTCATGGCAGAACAACACCAAAGAAAGTCTTCAATGTTGGTTCAGATGCTAATAACCATTCAGTTAAAACAAACAAGCCTCATGCAGAACTCTTAATCAATAACAAAGATGTTCACTTTCCAAAGCCAGAAAAGATTATCTCACCTCTGAATTCTGGCTTAGGAAACCAAATGGTGAAAATGAAGCTCCAACTAGAAGAAGAAGAAGAAGAGGAGGAACCGAGGAAATCGTTGGCAGTGTTTGGCTCCCCAATTCTGAAGAATCCCAGGATCAACAAGTCCTTGAGCTGTGATAAGAAGCTGAAAATCCCCTCAAGAGGTTCTGCTCCTAGAATGGAAGATATGATTGATTTCTCAGCAAACTCAGGATCAAACTACATCAATGATGCTGCTAGTGATGCAAGTTCAGACCTGTTTGAGATTGAGAGCATAAAAGGCAAGCCGAACTCGTTTCTTGCAAGACAAGCATCAGATGCTGCAAATTCAGGATGTGTTAGCCCCACATGTTATGCACCAAGTGAGGCAAGCATAGAGTGGAGTGTGGTCACTGCTAGTGCTGCAGTGCTCTCAGATAGTGAAGAGCAAATGTCTGAGGTCACCATAAGGAGTCCAATAAGGACACCATACACTCCCTCAAATGGAAAAACAAAGGGCAGCAGGGAGTCACAGAGGCGGCGCCACGGCATGCTTTTGGGCTGCAAGAGCCACAAAGCTGTGAGAGTTGCTGGTGATGCATTCATAACATATGAGAAACCGAGTTCTAGCCCTCAAACTCGGAGTCGAAAGAACAGTATCTCTCAGGTTCCAAGGTTTCCAGCAGAGTCAAGGCTTGGAAATTTTGGTGCAAGGCATGCTTATGCCTCACCACATGCATCATCACAACTGCTATACAAATAA	1452	0.4325	MVSTISSTAKISLHQLKTFNTDDNKSHLHDAIFSPYLNGQTSQKLNPFISNRRDQLHHGEKKEEDGEIGVFGAEKYFYEGEVEASSEADSNITPTKFLHQRDHQISLQTRQYKVQYGTPSVRSESTCNSQSALLHSAMTMRNSTRNKQNNKSQAKGFLAGLGLKCSCSDKNSVDTRDHVGEIYDVFHGRTTPKKVFNVGSDANNHSVKTNKPHAELLINNKDVHFPKPEKIISPLNSGLGNQMVKMKLQLEEEEEEEEPRKSLAVFGSPILKNPRINKSLSCDKKLKIPSRGSAPRMEDMIDFSANSGSNYINDAASDASSDLFEIESIKGKPNSFLARQASDAANSGCVSPTCYAPSEASIEWSVVTASAAVLSDSEEQMSEVTIRSPIRTPYTPSNGKTKGSRESQRRRHGMLLGCKSHKAVRVAGDAFITYEKPSSSPQTRSRKNSISQVPRFPAESRLGNFGARHAYASPHASSQLLYK*	484

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev03g0428	483	Coils	Coil	236	256	-	-
	Aev03g0428	483	MobiDBLite	consensus disorder prediction	383	412	-	-
	Aev03g0428	483	MobiDBLite	consensus disorder prediction	383	402	-	-
	Aev03g0428	483	MobiDBLite	consensus disorder prediction	435	455	-	-
	Aev03g0428	483	PANTHER	PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED	6	465	IPR039615	GO:0009638
	Aev03g0428	483	MobiDBLite	consensus disorder prediction	435	456	-	-
	Aev03g0428	483	PANTHER	PROTEIN PHYTOCHROME KINASE SUBSTRATE 1	6	465	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev03g0428	Aev-Chr3	3088325	3089776	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev03g0428	-		-	adu:107481087	491.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev03g0428	03	3088325	3089776	Aev03g0428	03	3088325	3089776	ECH