Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0259 ATGAGTTCGATTCCTTTGATCAACACTCTCACAGCTGTTGCTCCGCTTCGCTCCCTTTTACCTCCTCAATGCCGTGACCCTCTCCTTTCTACTGCCGTCCCTAAACGGCAACGTTCCTTCTCCTCAGCTGGGTTTCGGCCCGTGGTGACACTTGCCTCCGGCCCAAGCCCAGGCCCGACTATCAATTCAGCACCACGAGGGAATGGAACTTATACTGTTGAGGATTTCATGACAAAGAAACAGGATTTGTATGTTGTCAAGCCCACAACCCCCATTGATGAAGCTTTGGAGGCTCTCGTGGCCAACAGAATCAGTGGACTTCCGGTAGTCGATGACGACTGGAATCTGGTTGGAGTTGTTTCAGATTATGACTTGTTAGCAATTGATTCGATATCAGGTGGTCCTCAAAGCGATGCAAACTTGTTCCCTGACGTCAATAGTTCTTGGAAAACATTCAATGAGATACAAAAGCTGCTTAGTAAGACCAATGGAAAAGTTGTTGGTGACTTGATGACACCAACTCCACTTGTTGTTCATGAATCCACTAGTCTTGAGGATGCTGCCAGGCTGCTGCTTGAAACAAAATATCGTCGGCTACCTGTAGTTGACAAAGATGGAAAGCTGGTTGGGCTCATTACAAGGGGAAATATTGTTAAGGCAGCTCTTATGTCTAAACGTGCTGGCGAGTTGTGA 693 0.4719 MSSIPLINTLTAVAPLRSLLPPQCRDPLLSTAVPKRQRSFSSAGFRPVVTLASGPSPGPTINSAPRGNGTYTVEDFMTKKQDLYVVKPTTPIDEALEALVANRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGPQSDANLFPDVNSSWKTFNEIQKLLSKTNGKVVGDLMTPTPLVVHESTSLEDAARLLLETKYRRLPVVDKDGKLVGLITRGNIVKAALMSKRAGEL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0259 230 ProSiteProfiles CBS domain profile. 77 136 IPR000644 -
Aev03g0259 230 Gene3D - 68 227 IPR046342 -
Aev03g0259 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 35 227 - -
Aev03g0259 230 SMART cbs_1 82 130 IPR000644 -
Aev03g0259 230 SMART cbs_1 174 222 IPR000644 -
Aev03g0259 230 SUPERFAMILY CBS-domain pair 70 221 IPR046342 -
Aev03g0259 230 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 35 227 - -
Aev03g0259 230 Pfam CBS domain 167 221 IPR000644 -
Aev03g0259 230 Pfam CBS domain 73 127 IPR000644 -
Aev03g0259 230 ProSiteProfiles CBS domain profile. 171 230 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0259 Aev-Chr3 1991643 1994330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0259 - - gmx:100814621 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0259 03 1991643 1994330 Aev03g0259 03 1991643 1994330 ECH
Aev03g0259 03 1991643 1994330 Aev05g0666 05 4642561 4645106 ECH