Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0257 ATGGAGATCGCTCACGAGCCACCGCCTTCCCTCGACGGGAGCCCTGTCAACGTCGATAACGTCGCTAACTCTCCGTCTTCGTCGTCGTCTTCATCTCCTTCATCCTCCGCCTCCTCTTCCGCCTCGTCGCCGCGCGGTGCCAAGGGAAAAGAGATCGAGGCGAGCACCTCGTCGGCAGCACCGGCTGCGTCGCCAGCTGTCAGGTACGATGATGACGACGAGGAGGAAGAGGACGTGTGCCGGATATGCCGGAACCCTGGTGACGCCGAGAATCCGCTGCGGTATCCTTGCGCGTGCAGCGGTAGCATCAAGTTCGTGCATCAAGATTGTCTCCTTCAGTGGCTTAATCACAGCAACGCTCGTCAATGCGAGGTCTGCAAGCATGCATTCTCCTTCTCTCCTGTTTATGCTGAGAATGCCCCAGCTAGGTTACCTTTTCAAGAGTTTGTGGTTGGAATGGCAATGAAAGCTTGCCATGTTCTGCAATTCTTTTTGCGCTTGAGTTTTGTGCTATCTGTGTGGCTCCTGATTATACCTTTCATAACATTCTGGATATGGCGATTAGCTTTTGTGAGGAGTTTTGGTGAAGCCCAGAGACTATTCTTGAGTCATTTATCAACTGCAGTCATTCTGACTGATTGCCTCCATGGTTTCCTACTTTCTGCAAGCATCGTCTTCATTTTTCTAGGGGCCACTTCTTTGCGAGATTACTTTAGGCATTTGCGAGAAATTGGGGGACAGGATGCTGATAGAGAAGATGAAGTGGACAGAAATGGGGCTCGAATTGCTAGAAGAGCTCCTGGGCAAGCTAACCGTAATATTAATGGTGATGGGAATGGTGAAGATGCTGGAGGAGCACAAGGAATTGCAGGAGCTGGTCAAGTGATTAGAAGAAATGCTGAAAATGTTGCCGCACGGTGGGAGATGCAAGCAGCACGTCTTGAGGCCCATGTTGAGCAGATGTTTGATGGTCTTGATGATGCCGATGGAGCAGAGGATGTACCCTTTGATGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTTGGTTGAAAATGCATTTACTGTGCTGGCAAGCAATATGATTTTCCTTGGTGTTGTAATCTTTGTGCCGTTCTCATTGGGTCGCATCATACTCCATTATTTGTCCTGGTTCTTCTCAACCGCAAGTGGTCCTGTATTGTCAGCTGTTGCCCCACTTACAGATGCATCTCTTTCCCTTGCAAATATTACTTTAAAAAATGCATTAACTGCTGTTAAAAATTTGTCATCTGATGCACAAGAGGGTGGATCGATTGGTCAGGTTGCTGAAATGCTGAAAGTGAATGCTAGTGGATTGAGTGAAATGTCAAACAACATAACTGAATCTGTTTCAGCTGATCTATTGAAAGGAGGGTCAATTGGAACTTCAAGGCTTTCGGATGTCACTACTTTGGCAATTGGATATATTTTTATTTTCACTTTAATTTTCTGCTACTTTGGCATTGTTGCTTTGATTCGCTACACAAAGGGTGAGCCTTTGACCATGGGAAGGTTCTATGGTATTGCTTCAATAGCAGAGACAATTCCATCTCTCTTCAGGCAGTTTTTGGCAGCAATGAGGCATTTGATGACCATGGTTAAGGTTGCTTTCCTTTTAGTCATTGAACTTGGGGTATTTCCTTTGATGTGTGGGTGGTGGCTCGATGTTTGTACCATACAGATGTTCGGGAAGACAATGGTTCACAGAATTCAGTTCTTTTCTGCATCTCCTTTAGCCAGCTCATTGGTTCACTGGGTTGTGGGGATTGTGTATATGCTACAAATTAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGGAATGGAGTTTTGTACTTCCTTCGGGATCCTGCTGATCCAAACTATAATCCATTCCGTGATCTGATTGATGATCCTGTCCACAAGCATGCTCGCAGGGTTCTATTGTCGGTTGCTGTTTATGGGAGTTTGATTGTGATGCTGGTATTTTTGCCTGTTAAACTTGCCATGCGGATGGCCCCTTCCATTTTCCCACTTGACATATCGGTATCTGATCCATTCACCGAAATTCCAGCTGACATGCTTCTCTTTCAGATTTGTATCCCATTTGCTATTGAGCATTTTAAATTAAGGACAACTATCAAATCCCTGCTTCGTTATTGGTTCACAGCTGTTGGTTGGGCACTTGGTTTAACTGATTTCTTGCTGCCTAGACCTGATGACAACAATGGTGGTCAAGAAAATGGAAATGGGGAGCCAGCTAGGCAGGACAGGCTACAGGTCGTACAAGCAGGGGTGCATGATCAGGGTATGGTGGGATTTGCAGGCGACGATTTGAACAGGGTGATTAATGCAGCGGGAGAACTGAATGCTGGGGAGGATTATGATAACGAAGAGCAGTCTGATTCTGATTATGCTTTTGTGCTTCGCATTGTCCTTCTACTGGTGATAGCTTGGATGACTCTCCTTGTCTTCAACTCTGCCCTGATAGTTGTACCGATTTCACTTGGACGGACACTTTTCAATTCTATTCCCCGTCTCCCTATAACTCATGGCATTAAGTGCAATGATTTGTATGCATTCATCATTGGAAGCTATGTGATCTGGACTGCTGTTGCTGGAGTTAGATACTCAGTTGAGCAAATCAGAAAAAGGAGGGCTTCAGTTTTGTTGAACCAAATATGGAAGTGGTGTACTATTGTTGTGAAGAGTTCTGCACTTCTGGCCATATGGATATTTGTCATCCCTGTGCTAATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCAGTCGATGAAAGTCCAGTGTTCCTCCTTTATCAGGACTGGGCATTAGGCCTTATATTTCTGAAGATATGGACTAGATTGGTTATGTTGGACCACATGATGCCTCTTGTGGATGAAAGTTGGCGAGTAAAATTCGAGAGAGTGAGAGAGGATGGTTTCTCCAGGCTACAAGGCCTTTGGGTCCTTCGGGAGATTGTACTTCCAATCATAATGAAACTATTGACAGCTCTGTGTGTACCTTATGTTCTAGCCAGAGGTGTGTTTCCGGTACTTGGATACCCCTTGGTGGTCAATTCTGCTGTCTACCGGTTTGCATGGCTGGGATGCCTCTGCATCAGTTTCTTGTGCTTCTGTGCCAAGAGATTCCATGTTTGGTTTACAAATCTTCACAATTCAATACGTGATGACCGGTATCTGATCGGCCGGAGGTTGCATAACTTTGGGGAGCATGTCGAGAGGGCAAATGAAGCAGGAACTTCTACAGTGATTCAAGATACTATTTTATCTGATCGTGAAGCTGATGTTGGACTGCGGTTGAGACGGATAAATCAACAGGCAGCCTGA 3363 0.4561 MEIAHEPPPSLDGSPVNVDNVANSPSSSSSSSPSSSASSSASSPRGAKGKEIEASTSSAAPAASPAVRYDDDDEEEEDVCRICRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQFFLRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLREIGGQDADREDEVDRNGARIARRAPGQANRNINGDGNGEDAGGAQGIAGAGQVIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRIILHYLSWFFSTASGPVLSAVAPLTDASLSLANITLKNALTAVKNLSSDAQEGGSIGQVAEMLKVNASGLSEMSNNITESVSADLLKGGSIGTSRLSDVTTLAIGYIFIFTLIFCYFGIVALIRYTKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDVCTIQMFGKTMVHRIQFFSASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWFTAVGWALGLTDFLLPRPDDNNGGQENGNGEPARQDRLQVVQAGVHDQGMVGFAGDDLNRVINAAGELNAGEDYDNEEQSDSDYAFVLRIVLLLVIAWMTLLVFNSALIVVPISLGRTLFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGVRYSVEQIRKRRASVLLNQIWKWCTIVVKSSALLAIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLVDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWLGCLCISFLCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVERANEAGTSTVIQDTILSDREADVGLRLRRINQQAA* 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0257 1120 PANTHER ZINC FINGER, RING-CH-TYPE, ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 69 1070 - -
Aev03g0257 1120 CDD RING_CH-C4HC3_MARCH6 79 128 - -
Aev03g0257 1120 Pfam RING-variant domain 80 126 IPR011016 GO:0008270
Aev03g0257 1120 ProSiteProfiles Zinc finger RING-type profile. 80 127 IPR001841 -
Aev03g0257 1120 MobiDBLite consensus disorder prediction 16 45 - -
Aev03g0257 1120 SUPERFAMILY RING/U-box 74 130 - -
Aev03g0257 1120 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 138 IPR013083 -
Aev03g0257 1120 SMART ringv_2 79 127 IPR011016 GO:0008270
Aev03g0257 1120 MobiDBLite consensus disorder prediction 1 73 - -
Aev03g0257 1120 Coils Coil 297 317 - -
Aev03g0257 1120 PANTHER SSM4 PROTEIN 69 1070 - -
Aev03g0257 1120 MobiDBLite consensus disorder prediction 252 283 - -
Aev03g0257 1120 ProSiteProfiles Zinc finger RING-CH-type profile. 72 133 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0257 Aev-Chr3 1973088 1978558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0257 K10661 - gmx:100813205 1967.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0257 03 1973088 1978558 Aev03g0257 03 1973088 1978558 ECH