LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g2090	ATGAGAACAGGAAGTTGTGCCGTGCAACAAGGGCTAACCCAAGAGGCTGCAAGCATAGTGAAGCAAGCCGTGACGCTCGCAAAGCGCCGCGGCCATGCTCAAGTTACACCACTTCATGTTGCAAGCACCATGCTTTCAATTACCAATGGTCTATTAAGAAACGCTTGTCTCCAATCTCATTCCCACCCTCTTCAATGCAAGGCCTTGGAGCTTTGCTTCAATGTTGCACTCAACAGGTTACCAGCTTCATCTTCAAGCCCTATGCTAGGGCCTCACCACCATCACCACCACAATCAATGTCCTTCTATCTCGAATGCTTTGGTTGCCGCTTTCAAGCGTGCTCAGGCTCACCAACGCCGCGGATCGATAGAGAATCAACAACAACCGTTGTTGACGGTGAAGATTGAGATTGAGCAACTCATAATCTCAATCTTAGATGACCCTAGTGTTAGTAGGGTCATGAGAGAGGCAGGGTTCTCTAGCTTACAAGTTAAGAGTAATGTGGAACAAGTTGTGTCTTTGGAGATTTGCTCAAAGAAGAGTAGTAATAATACTAACAATAATAGCCCTAATCCTTCTCTTAGTGATGCCAACAAGTCAAAGAAGGATCATAACAATAAAAATGATCAAGGTGGTGATGGAAACAACAACAAAAAAACATCATTGGTATTAGATCCTATTATTAGGGAAGAGGATATTTCTAGTGTGATAGAAAATTTGGTGATGAGTTGTGGTCAAAGGAGAATAAAGAGCACTGTGGTTGTTGGTGAGTGTGTTTCTACTCTTGAAGGTGTAGTTAAGGGAGTGATGGATAAGGTTGAGAAAGGTGATGATGTTAGTGAAGTTCTTAGAGGTGTCAAGTTTGTGACCCTCTCTCTTTCTTCTTTTGTCAATCTTTCTAGAGTGGAAGTTGAGCAAAAGGTTGAAGAGATTAGGAAGATAATAATAATGAATTCATCATCAAATGGTAATAAAGGGTGTGTTTTGTATCTTGGAGATCTTAAATGGGTGTTTGATTATAGGGCAAGTTATTCTTCTTCTTCTTCTTCTAGTAGCCAACAAGGTAGGGTTTGCTATTGCCCTGTGGATCACATGATAATGGAGATTGCAAAATTGGTGAGTAGTGTTGGAGACAATAATAATAGTAATAATAATAATGGAAGGTGTTTTTGGATTATGGGGATTGCAACTTTCCAAGCTTATATGAAGTGCAAAATTGGAGAACCATCATTGGAGAGTCTTTGGGGTCTTCATCCTATTACTATTCCTTCAGGGAGCTTGAGCTTGAGTCTCATCACTGACAGTGGTCTACAAAATCAACCCACCAACACGAAATCTGATGATGATAGAACTAGCTGGCTATTACTCGAAGGAGTGGGAAGTGATAATAATAATAATAATAATCATAATCATAGTGACAATGATGATTATGATGATGATAAGAAGAAGCATCAATCTAAGGTTGAGAGTACTTGTAACAGTGATTCATCCCTCCCTGCATGGCTCCAACAGTGCAAAAATGAGAAAAGAGGACTCACCACCACCTTTATTCATCAGGACTGTGTCCCAGTGAGAGAGCTTTGCAAGAAGTGGAACTCATCAATGTGCAGCTCAATGCAAAAATTACAACCCTACCCTTCTTCTGAGAAAACCTCCTACCCTTTGTGGATCTCATCATCATCATCAAATCCAAGTTCCAACCCTAATTCAACATGTTCTAGTGACATCATCATGGAAGAAACAGAGCACAAAAGCAATTTCAAAGAGCTCAATTCAGAGAATCTCAAAACCCTTTGCAATGCTTTGGAGACAAAAGTGCCATGGCAAAAGGACATCATACCTGAAATTGTAAGCACCCTTTTGCAATGCCGGTCAGGAATGAGAAGAAGAAAAGGAAAAAATAAAAATAATAATAATAATTCTTATTATAGTGATGTGATGAAAGAAGAGACATGGTTTTTCTTCCAAGGTGTTGATGTTGAAGGAGCAAAAGAGAAAATTGCTAGGGAATTGGCTAGGCTTGTTTTTGGGTCACAAAACAATAATTTCATCTCAATTTCACTTTGTAATTTTGCATCATCAACAAGAGAAGATTCAAGTGAGGAAAATTATTATTGTTGTTGTAGGAGCAATAACAAGAGGTCAAGGGAAGAACAGAGTAGTTGTAGTTACATTGAGAGGTTCATTGAAGCTGTTTCTTGTAACCCTCATAGGGTTTTCTTTGTTGAGGACATTGAACAAGCTGATTATTGTTCTCAACTTGCTTTCAAAAGGGCTATTGAGAGAGGAAAAGTTGAAGATTCTTCAAATGGTCAAGAGTTTGGACTTTGTGATGCTATCATCATTTTGAGTTGTGAAAGTTTTAGTTCAAGGTCAAGGTCAAGGGCTTGCTCTCCTAATAGTAATAATTTTTTGACCAAGCAAAAATCTTGTGAAGGTTCAAGAGAAGAAGAAGAAGAAGAAGAGAAGAAGAATAATTCCATTGGTGAGACAAGAAGCCCTAATTGTGTTTCTTTGGATTTGAATATTTCAATTGATGATGATGATGAATGTGGTGATGATCATGATGAGGATAGGTCAATGGATGAAATTGGACTTGTTGACTCTGTGGACAGAAAGGTTATGTTCAAATTTCATCAGGAATTATGA	2649	0.3881	MRTGSCAVQQGLTQEAASIVKQAVTLAKRRGHAQVTPLHVASTMLSITNGLLRNACLQSHSHPLQCKALELCFNVALNRLPASSSSPMLGPHHHHHHNQCPSISNALVAAFKRAQAHQRRGSIENQQQPLLTVKIEIEQLIISILDDPSVSRVMREAGFSSLQVKSNVEQVVSLEICSKKSSNNTNNNSPNPSLSDANKSKKDHNNKNDQGGDGNNNKKTSLVLDPIIREEDISSVIENLVMSCGQRRIKSTVVVGECVSTLEGVVKGVMDKVEKGDDVSEVLRGVKFVTLSLSSFVNLSRVEVEQKVEEIRKIIIMNSSSNGNKGCVLYLGDLKWVFDYRASYSSSSSSSSQQGRVCYCPVDHMIMEIAKLVSSVGDNNNSNNNNGRCFWIMGIATFQAYMKCKIGEPSLESLWGLHPITIPSGSLSLSLITDSGLQNQPTNTKSDDDRTSWLLLEGVGSDNNNNNNHNHSDNDDYDDDKKKHQSKVESTCNSDSSLPAWLQQCKNEKRGLTTTFIHQDCVPVRELCKKWNSSMCSSMQKLQPYPSSEKTSYPLWISSSSSNPSSNPNSTCSSDIIMEETEHKSNFKELNSENLKTLCNALETKVPWQKDIIPEIVSTLLQCRSGMRRRKGKNKNNNNNSYYSDVMKEETWFFFQGVDVEGAKEKIARELARLVFGSQNNNFISISLCNFASSTREDSSEENYYCCCRSNNKRSREEQSSCSYIERFIEAVSCNPHRVFFVEDIEQADYCSQLAFKRAIERGKVEDSSNGQEFGLCDAIIILSCESFSSRSRSRACSPNSNNFLTKQKSCEGSREEEEEEEKKNNSIGETRSPNCVSLDLNISIDDDDECGDDHDEDRSMDEIGLVDSVDRKVMFKFHQEL*	883

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	469	489	-	-
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	180	196	-	-
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	457	495	-	-
	Aev02g2090	882	SUPERFAMILY	Double Clp-N motif	12	167	IPR036628	-
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	810	828	-	-
	Aev02g2090	882	Gene3D	-	574	836	IPR027417	-
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	807	835	-	-
	Aev02g2090	882	PANTHER	CHAPERONE PROTEIN CLPD, CHLOROPLASTIC	1	563	-	-
	Aev02g2090	882	PANTHER	CHAPERONE PROTEIN CLPD, CHLOROPLASTIC	560	880	-	-
	Aev02g2090	882	ProSiteProfiles	Clp repeat (R) domain profile.	8	174	IPR004176	-
	Aev02g2090	882	PANTHER	PROTEIN SMAX1-LIKE 3	1	563	-	-
	Aev02g2090	882	PANTHER	PROTEIN SMAX1-LIKE 3	560	880	-	-
	Aev02g2090	882	Gene3D	-	9	173	IPR036628	-
	Aev02g2090	882	Pfam	Clp amino terminal domain, pathogenicity island component	135	172	IPR004176	-
	Aev02g2090	882	Pfam	Clp amino terminal domain, pathogenicity island component	23	54	IPR004176	-
	Aev02g2090	882	MobiDBLite	consensus disorder prediction	180	220	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g2090	Aev-Chr2	22447923	22452414	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g2090	-		-	gmx:100807485	908.286

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev02g2090	02	22447923	22452414	Aev07g2108	07	22168624	22173971	ECH
	Aev02g2090	02	22447923	22452414	Aev03g0893	03	7307820	7312534	ECH
	Aev02g2090	02	22447923	22452414	Aev02g2090	02	22447923	22452414	ECH
	Aev02g2090	02	22447923	22452414	Aev01g1466	01	17269508	17280058	ECH