Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1977 ATGTCTTCTTTTTTCCCTTTCTGTAATAAGGCAAATAAGAACAGTCTGCATTATCCACTCTACTCTGTTTCTTTCTCTCTGTGTTCAATGTGGACGCAGCAACTGTTTCTACCTCAACCGACCCACAAGCCTTTCTTCATTCCTTCATCCACAATCCCTTCAAAAACGCAATCTTTTCACCAATTTCTTCCGACCCACAATGGAAAAATCTCATCATCATGGGGTAACAAGAGCATAATAATAAAGGCCAAAAAAACAGGTTTTGAAGAAGAGCTTCCACCAAACGCAGTTCGTAGGAAGAGGGACCCACAATGGAGAGGAGGGTTCAGCCTTGGCGTTGACTTGGGAATGGCTCGCACTGGTCTTGCCCTCAGCAAAGGCTTCTCCGTTCGACCTTTAACTGTTTTGGAACTGCGAGGACAAAAGCTCGACACCCGGATTCTTGACATTGCTGAAGAAGAGGAGGCTGATGAGTTCATAATTGGACTTCCGAAATCGTTTGATGGGAAGGAAACGCCGCAGTCGAACATAGTTCGTAGTGTTGCAGGAAGACTTGCTATTCAAGCTGCAGAGAGGGGCTGGAGAGTGTATCTGCAGGATGAACATGGCACAACAACAGAAGCAGTAGATCGAATGATCAACATGGGCCTAAGTAAGTCTTCCCAGCAGAGGAAACTCGATGCGTATGCTGCCATGATGGTTCTTGAGAGATATTTCTCCACATCAGGTGAGGATGCTGAACTTGTTTTGCCAAAGAATCAAGAACTTCGAGGGATACTTCGAAGGGGTCCTCCGAAAGACGCCGATTTATTCTCCGACGAAGACGAAGATTGA 834 0.458 MSSFFPFCNKANKNSLHYPLYSVSFSLCSMWTQQLFLPQPTHKPFFIPSSTIPSKTQSFHQFLPTHNGKISSSWGNKSIIIKAKKTGFEEELPPNAVRRKRDPQWRGGFSLGVDLGMARTGLALSKGFSVRPLTVLELRGQKLDTRILDIAEEEEADEFIIGLPKSFDGKETPQSNIVRSVAGRLAIQAAERGWRVYLQDEHGTTTEAVDRMINMGLSKSSQQRKLDAYAAMMVLERYFSTSGEDAELVLPKNQELRGILRRGPPKDADLFSDEDED* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1977 277 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 55 275 IPR005227 GO:0006364
Aev02g1977 277 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 55 275 - -
Aev02g1977 277 CDD YqgF 111 239 IPR005227 GO:0006364
Aev02g1977 277 Hamap Putative pre-16S rRNA nuclease [yqgF]. 108 243 IPR005227 GO:0006364
Aev02g1977 277 Gene3D - 110 247 IPR037027 GO:0006139
Aev02g1977 277 Pfam Holliday junction resolvase 110 240 IPR005227 GO:0006364
Aev02g1977 277 MobiDBLite consensus disorder prediction 258 277 - -
Aev02g1977 277 SUPERFAMILY Ribonuclease H-like 109 241 IPR012337 -
Aev02g1977 277 SMART rnase_8s 108 208 IPR006641 GO:0006139
Aev02g1977 277 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 111 239 IPR005227 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1977 - - lja:Lj3g3v1440180.1 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1977 02 21558361 21560604 Aev02g1977 02 21558361 21560604 ECH