Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1961 ATGGCTAGCCTCAAGTTTGCATGTGTGGTTCTCATGTGCTTGGCCTTGGTGGGTGCACCAATGGTCGAGGCCATCACATGTGGGCAAGTCACTAGTGCTCTAGCACCATGCATCCCATTCATCACCAAGGGTGGAGCAGTTGCCGCAGCTTGCTGCAACGGGGTTAGGGGCCTTGTTGACGCCGCCAAGACCACCGCTGACCGCCAGGCTGCATGCAACTGCTTAAAGAGCGCCGCCGGTGCGGTCTCGGGCTTCAATGCCAACAATGCTGCCATACTCCCCGGCAAATGTGGGGTTAGCATCCCCTACAAGATCAGCACCACCACCAATTGTGCTGCCATCAAGTTCTGA 351 0.5698 MASLKFACVVLMCLALVGAPMVEAITCGQVTSALAPCIPFITKGGAVAAACCNGVRGLVDAAKTTADRQAACNCLKSAAGAVSGFNANNAAILPGKCGVSIPYKISTTTNCAAIKF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1961 116 SMART aai_6 27 111 IPR016140 -
Aev02g1961 116 CDD nsLTP1 25 111 - -
Aev02g1961 116 ProSitePatterns Plant lipid transfer proteins signature. 93 114 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 PANTHER - 1 113 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 Pfam Protease inhibitor/seed storage/LTP family 27 111 IPR016140 -
Aev02g1961 116 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 1 113 - -
Aev02g1961 116 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 25 113 IPR036312 -
Aev02g1961 116 Gene3D - 24 116 IPR036312 -
Aev02g1961 116 PRINTS Plant phospholipid transfer protein signature 84 101 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 PRINTS Plant phospholipid transfer protein signature 102 113 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 PRINTS Plant phospholipid transfer protein signature 46 60 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Aev02g1961 116 PRINTS Plant phospholipid transfer protein signature 67 82 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1961 Aev-Chr2 21418770 21419607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1961 4 115 Acyl Lipid Metabolism Gene Families AT2G38540 50.435 1.94e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1961 - - fve:101306061 150.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1961 02 21418770 21419607 Aev06g2967 06 31354630 31355967 PCT