Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1932 ATGTTTAACTCCCAAGTTCCCTTCAAAACCTTCCACCAGTTACCTTTACAACAGTATTTCAAGCTTGGGGGAAACAAGTTTCTGCACGCATTCAAACATGAACACCAACTGTTCGACCATATTCCCCACCCAAATGTTGCATCTGCTAACCGCTCCATGCTCACCCTTTTGCACAAAAACCTTCCTTTTCAAGCCCTTGCTGTTTTCAAGACCCAGTTCCAGCTATGTTCACTTGACAGTGTTGATGAGGTCACTGTTGCCTTGTCCCTCAAGGCTTGTCAAGGAGAGCCAAGACTTGGGACACAAATCCACAGTTTCTCAGTGTCTACTGGGTTCGTTTCGCAGGTCATGGTGTCAAATTCCCTGATGAAAATGTACTGCAAGAGTGGGAGTTTCAAGAGGGCATGGCGTGTGTTTGAGAATTTGAGTTGCCCTGACATAGTTTCTTGGAACACCATGCTATCGGGTTTTGAGGAGAGTGTGGATGCTCTGAGTTTTGCTTGTTCTATGCATTTGAATGGGATTGTGTTTGATCCGGTGACATACACCACTGTTCTTGCCTTTTGCTTGGATGATCGTGGATTTTGTTTTGGATGGCAGTTGCATTCTCTTGTCATGAAATTTGGATTTGGTTGTGAAGTTTATGTTGGGAATGCGCTTATAACAATGTATTCGAGGTGGGGGAGGTTGGTTGAGGCTAGGAGGGTGTTTGATGAAATGCCCCAAAGGGATTTGGTTTCTTGGAATGCGATGCTTTCGGGATATGCTCAAGAGGGGGAATGTTATGGGTTGGAAGCAGTTTCATTGTTTGTCAACATGGTAAGACAAAGTTTGTTGTTGCTTGACCATGTTTCTCTAGCCAGTGCGGTTTCGGCTTGTGGTTATATGAAAAACTTAGAGCTAGGGAGGCAGATACATGGTTTGACCCTGAAAGTGGGATATGGAACACACGTTTCAGTTTGCAATGTTTTGATCTCGACTTATTCAAAATGTGAGGTCAACAGAGATGCAAAACTGGTTTTTCAGCTCATGAGTAACCGCAATGTAGTCTCATGGACAACAATGATTTCTATTGATGAAGATGATGCGATGTCTCTTTTCAAAGAGATGAGGGTAGATGGTGTGTATCCAAATGATGTTACATTTATAGGACTAATACATGCTATAACAATCAGGAATCTGGTGGCAGAAGGTCACATGATTCATGCATTTTGTATAAAAAGCAGCTTTTTGGCAGAACAACATGTTTCTAATAGCCTCATTACCATGTATGCTAAGTTTGAATCCATTCAAGAAGCAAAGAAGATTTTTGAGGAGCTTAACTACAGAGAAACAATATCATGGAATTCATTAATATCAGGGTATGCTCAGAATGGTTTGTGTAAGGAGGCTTTCCTTACATTTTTGTCTGCAATAAAGGAGATAAAGCCCAACCAATACACATTTGGAAGTGTCTTAAATGCTATAGCTGCGGCTGAGGATATATCGTTGAAACATGGGCAACGTTGCCATTCTGAATTGCTCAAGCGTGGTTTAAGCACTGACCCAATTGTTTCTGCGGCTCTGCTTGACATGTATGGCAAGCGACTCCTTGATGAGGCGGAAGAGTTGCTGCATCAGATTCCAGGAGGACCTGGGCTTTCAGTGTTGCAAAGCTTGCTTGGCTCTTGTAGAATACATGGAAATGTGGAGATGGCTGAGAAGGTTGTCGATAGAGTTTATAGGATTGCAAATGAAATTTTCAAAAGAGTGCATAGAGAGGGAAGGAGAGTGGTATCAGGCATTACAAATCCAAAACTAAATAGGACTGCGATGCGATGGTTGATCGACTGTGGAATGGATAGCACTAAATTCTGTGGCAACATCAGAGGTTTCATGATTCATGGTGGAGACCAAACTGGTATTGGCAAAAGGAGGACCAGTATATGGGGCAAGAGATTCAATGATGAGATAAGAGAATCTCTCAAGGTAAAGTTCATGCACTGCATTATATTTTTGTGTCTCTACACTAATAATCATCTTATTTATTTATCCCCTTTATTATATTTTGCGTTTATATTTAAATTATTGAATCATACTACGAGTATGTTTGTGAGACTCATTCCTCTATGTGATCCCACCATTGTTGCCAATGGGAATTACATCAGGAGGTTTGTCCACCAAATGCTACCTAACTCATGTGATTAG 2187 0.4147 MFNSQVPFKTFHQLPLQQYFKLGGNKFLHAFKHEHQLFDHIPHPNVASANRSMLTLLHKNLPFQALAVFKTQFQLCSLDSVDEVTVALSLKACQGEPRLGTQIHSFSVSTGFVSQVMVSNSLMKMYCKSGSFKRAWRVFENLSCPDIVSWNTMLSGFEESVDALSFACSMHLNGIVFDPVTYTTVLAFCLDDRGFCFGWQLHSLVMKFGFGCEVYVGNALITMYSRWGRLVEARRVFDEMPQRDLVSWNAMLSGYAQEGECYGLEAVSLFVNMVRQSLLLLDHVSLASAVSACGYMKNLELGRQIHGLTLKVGYGTHVSVCNVLISTYSKCEVNRDAKLVFQLMSNRNVVSWTTMISIDEDDAMSLFKEMRVDGVYPNDVTFIGLIHAITIRNLVAEGHMIHAFCIKSSFLAEQHVSNSLITMYAKFESIQEAKKIFEELNYRETISWNSLISGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSELLKRGLSTDPIVSAALLDMYGKRLLDEAEELLHQIPGGPGLSVLQSLLGSCRIHGNVEMAEKVVDRVYRIANEIFKRVHREGRRVVSGITNPKLNRTAMRWLIDCGMDSTKFCGNIRGFMIHGGDQTGIGKRRTSIWGKRFNDEIRESLKVKFMHCIIFLCLYTNNHLIYLSPLLYFAFIFKLLNHTTSMFVRLIPLCDPTIVANGNYIRRFVHQMLPNSCD* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1932 728 Gene3D - 555 668 IPR029000 -
Aev02g1932 728 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 244 280 IPR002885 -
Aev02g1932 728 Pfam PPR repeat 418 440 IPR002885 -
Aev02g1932 728 Pfam PPR repeat 218 244 IPR002885 -
Aev02g1932 728 Pfam PPR repeat 120 140 IPR002885 -
Aev02g1932 728 Pfam PPR repeat 446 468 IPR002885 -
Aev02g1932 728 Pfam PPR repeat 246 274 IPR002885 -
Aev02g1932 728 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 243 IPR002885 -
Aev02g1932 728 Gene3D Tetratricopeptide repeat domain 71 194 IPR011990 GO:0005515
Aev02g1932 728 Gene3D Tetratricopeptide repeat domain 198 300 IPR011990 GO:0005515
Aev02g1932 728 Gene3D Tetratricopeptide repeat domain 359 500 IPR011990 GO:0005515
Aev02g1932 728 PANTHER OS07G0670000 PROTEIN 474 576 - -
Aev02g1932 728 PANTHER OS07G0578800 PROTEIN-RELATED 28 472 IPR045215 GO:0003723|GO:0009451
Aev02g1932 728 SUPERFAMILY Cyclophilin-like 613 655 IPR029000 -
Aev02g1932 728 PANTHER OS07G0670000 PROTEIN 28 472 - -
Aev02g1932 728 PANTHER OS07G0578800 PROTEIN-RELATED 474 576 IPR045215 GO:0003723|GO:0009451
Aev02g1932 728 TIGRFAM PPR: pentatricopeptide repeat domain 120 141 IPR002885 -
Aev02g1932 728 TIGRFAM PPR: pentatricopeptide repeat domain 218 245 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1932 Aev-Chr2 21157826 21160677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1932 90 576 Glycoside Hydrolase AT3G49170 28.937 5.74e-59 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1932 - - lja:Lj3g3v2723660.1 807.749