Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1919 ATGAAGAAACAAAAACAACATCAGAAACTTGCAACGAACCCTTTTGATGTTCTCTCCGAGGAACTCATTTTCTCAATCCTCGACTTCCTCGAACTCGACCCCACATCCAAGAAATCCTTCTCTTTGGTCTGCCGTTCCTTCTACTCCGCCGAGTCCCGCCACCGCCGCACCCTCCGCCCACTCCGCTCCGACCACCTCCCCACCGTCCTCTCCCGCTACCGCTCCGCCACCACCCTCGACCTCACCCTATGTCCGCGCGTAACCGACGCGTCACTCGCCGTCATCTCCGGCGGCGCGTGCAGACACGCGCTCCGTCGCCTCGACCTCTCCCGGTCGAGGTTCTTCACTGCCGCGGGGCTTCTGAGTGTGGCGGTGAACTGTCATAACCTGACGGAGCTTGACCTGTCGAACGCGACGGAGCTCCGGGACGCGGCGGCGGCTGCGGTGGCGCGTGCGAAGAACTTGGAGAAACTATGGCTTTCAAGGTGTAAGCTTGTTACGGATATGGGAATTGGGTGTATAGCAGTTGGGTGCAGGAAATTGAAGCTGATAAGCTTGAAATGGTGTGTGGGTATTGGAGATTTGGGGGTTGAATTGGTTGCAATTAAGTGCAAGGAGCTTAGGAATTTGGATCTCTCTTATTTACCTATCACAGAGAAATGTCTGCAATCAATCTTTAAGTTGCAACATCTTGAAGATTTGGTCCTCGAAGGATGCTTTGGCATTGACGATGACAGCCTAGAAGATGATGTCTTCAAACAAGGGTGCAAGACATTAAAGAAACTTGATATCTCAGGCTGTCAAAACATAAGTCATATCGGTCTCTCAAAGTTAACAAGCATCTCCGGATGCGTAGAGCAACTCATCTTGGCAGATGGTTCTCCTGTAACCCTTGCTCTTGCTGATGGTTTGAGTAAACTGTCCATGTTGCAATCGATTGTATTAGACGGATGCCTGGTTACTTCTGCCGGATTAAGGGCCATTGGAAATTTGTGCATTTCACTCAGGGAACTGAGCCTAAGCAAATGTATGGGAGTGACAGATGAAACTCTCTCTTTCCTTGTGTCAAAACACAAAGATTTAAGGAAGCTCGACATCACATGCTGCCGCAAGATAACTGATATTTCCATTGCCAGCATCGCGAATTCATGCACTAATCTCACTTCTCTCAAAATGGAGTCATGCACTCTTGTTCCACAAGAAGCATTTGTCTTGATTGGACAGAAGTGTCATTCTCTTGAGGAGCTTGATGTAACAGATAACGAAATTGATGATGAAGGTCTTAAGTCCATTTCTCGTTGTTCCCGGCTCTCCAGCCTGAAGATAGGAATCTGCCTGAACATTACCGACAGAGGACTTGCCTACGTTGGGATGTGTTGCTCAAAGTTAAAGGAGTTGGATCTCTACAGGTCAACAGGAATAACAGATTTGGGCATTTCAGCAATTGCTCACGGTTGCCCTGGCCTTGAGATGATAAATACATCATATTGTACTAGCATCACTGATAGTTCATTAATCTCCTTGTCTAAATGCCCAAATTTGAAGGCACTCGAAGTTCGTGGATGTCCAATTGTTTCATCTCTAGGTCTGACAGTCGTTGCAATGAATTGCAAACAACTAAGCCGTCTAGACATAAAGAAGTGTTACAACATCGACGATAGTGGGATGATTCCACTGGCTCATTTCTCGCAAAATCTTAGACAGATAAATTTGTCATATAGCTCAGTGACAGATGTGGGGCTCCTGTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACCGTGCTTCACCTTCAGGGCTTGGCTCCGGGAGGCCTCGCTGCAGCCTTGTTGGCATGTGGAGGGCTAACAAAAGTGAAGCTCCATGTTTCATTGAGATCTGTGTTACCCGAGCCGCTAATCAAACACGTAGAAGCACGTGGCTGTGTGTTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCGAAATGCTGGAAATTACAAGCAGAAGATCTGATGCAATAG 2010 0.4756 MKKQKQHQKLATNPFDVLSEELIFSILDFLELDPTSKKSFSLVCRSFYSAESRHRRTLRPLRSDHLPTVLSRYRSATTLDLTLCPRVTDASLAVISGGACRHALRRLDLSRSRFFTAAGLLSVAVNCHNLTELDLSNATELRDAAAAAVARAKNLEKLWLSRCKLVTDMGIGCIAVGCRKLKLISLKWCVGIGDLGVELVAIKCKELRNLDLSYLPITEKCLQSIFKLQHLEDLVLEGCFGIDDDSLEDDVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGCVEQLILADGSPVTLALADGLSKLSMLQSIVLDGCLVTSAGLRAIGNLCISLRELSLSKCMGVTDETLSFLVSKHKDLRKLDITCCRKITDISIASIANSCTNLTSLKMESCTLVPQEAFVLIGQKCHSLEELDVTDNEIDDEGLKSISRCSRLSSLKIGICLNITDRGLAYVGMCCSKLKELDLYRSTGITDLGISAIAHGCPGLEMINTSYCTSITDSSLISLSKCPNLKALEVRGCPIVSSLGLTVVAMNCKQLSRLDIKKCYNIDDSGMIPLAHFSQNLRQINLSYSSVTDVGLLSLASISCLQSFTVLHLQGLAPGGLAAALLACGGLTKVKLHVSLRSVLPEPLIKHVEARGCVFEWRDKVFQAELDPKCWKLQAEDLMQ* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1919 669 SUPERFAMILY RNI-like 254 502 - -
Aev02g1919 669 SUPERFAMILY RNI-like 63 280 - -
Aev02g1919 669 SMART LRR_CC_2 101 126 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 384 409 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 332 357 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 410 434 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 537 562 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 307 331 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 127 152 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 563 587 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 204 228 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 178 203 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 73 98 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 358 383 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 460 485 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 435 459 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 153 177 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 256 281 IPR006553 -
Aev02g1919 669 SMART LRR_CC_2 486 511 IPR006553 -
Aev02g1919 669 SUPERFAMILY F-box domain 12 68 IPR036047 GO:0005515
Aev02g1919 669 Gene3D Ribonuclease Inhibitor 403 645 IPR032675 -
Aev02g1919 669 Coils Coil 138 158 - -
Aev02g1919 669 Pfam Leucine Rich repeat 256 278 IPR001611 GO:0005515
Aev02g1919 669 Pfam Leucine Rich repeat 460 483 IPR001611 GO:0005515
Aev02g1919 669 Pfam Leucine Rich repeat 409 432 IPR001611 GO:0005515
Aev02g1919 669 Pfam Leucine Rich repeat 563 585 IPR001611 GO:0005515
Aev02g1919 669 Pfam Leucine Rich repeat 126 149 IPR001611 GO:0005515
Aev02g1919 669 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 1 612 - -
Aev02g1919 669 PANTHER UNCHARACTERIZED 1 612 - -
Aev02g1919 669 SUPERFAMILY RNI-like 460 607 - -
Aev02g1919 669 Gene3D Ribonuclease Inhibitor 10 199 IPR032675 -
Aev02g1919 669 Gene3D Ribonuclease Inhibitor 200 295 IPR032675 -
Aev02g1919 669 Gene3D Ribonuclease Inhibitor 296 402 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1919 Aev-Chr2 21013478 21017640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1919 K10268 - gmx:100803617 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1919 02 21013478 21017640 Aev02g1919 02 21013478 21017640 ECH