Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1913 ATGATCCATCTGGGTCACTCTCAAAATCCCACCTTGATGATGGATTCTAGTGCCCCAAACACACCCTTTCAAGACACCCCTGAAACAGCTTCACCCAAGCCTTACAAGAAGAGCTTTGTTTCAACTCTAATGGAAGCTGCAACACTCAGAACACCTTCATTCAAGGAAGACAACTACTTTGTCTCCCTCTTGAAACCCTCAGAGAGGAAATCACTCCAAGAGCTCAAGGAAAAGCTCAAAAATGCCTCACAATCATCTTCTAATGATGGTGAAAATGTTGAGAATAATGGTGTTGTTTCTTCTGGTACTGCTACCATGTGGGGGATTCCACTACTTGGTGGTGATGACAGAGCTGATGTAATACTCTTGAAGTTCCTCAGAGCAAGGGATTTTAGGGTTGGTGATGCTTTCACAATGCTTTTGAAATGCTTAAATTGGAGGAAGGATTTTGGGGCTGAAACCATTGTTGATGAGGATTTAGGGTTCAAGGAGCTTGAAGGTGTAATAGCATATATGCAAGGTTATGACAAAGAAGGACACCCTGTTTGTTACAATGCATATGGGGTTTTTAGGGATAAGGAGATGTATGAGAGGATCTTTGGTGATGATGAGAAGCTTAAGAAGTTCCTTAGGTGGAGGGTACAGGTCCTTGAGAGGGGCATCAAGCTCTTACATTTCAAGCCTGGTGGGGTCAATTCCCTTATTCAGGTCACTGATCTTAAGGACATGCCCAAAAGGGAGCTTAGGGTTGCTTCTAACCAGATCCTCTCATTGTTTCAAGATAACTACCCTGAAATGGTGGCTAGAAAGATTTTCATCAATGTGCCTTGGTACTTCAGCATGTTGTATTCAATGTTCAGCCCTTTTCTGACTCAAAGAACTAAGAGCAAGTTTGTGATCTCTAAGGAAGGAAATGCTGCTGAGACACTCTACAAATTCATAAGGCCTGAGGATATTCCTGTTCAGTATGGAGGACTTAATAGGGCCAGTGATTTGCAGAATGGTCCCCCAAAACCTGCTTCTGAGTTCACTGTCAAAGGAGGGGAGAAAGTGAACATACAAATAGAAGGAATCGAGGGTGGTGCAACTATCACATGGGACATAGTGGTAGGTGGTTGGGACTTAGAATACAGTGCTGAGTTTGTACCAAATGCTGAAGGAAGTTACACTATTGCTGTTGAAAAGCCAAGGAAGGTTTTGTCCTCTGAGGAAGCTATTCACAACTCTTTCACTTCAAAGGAAAATGGCAAAATGGTTCTCTCTGTTGATAACTCTTCCTCTAGGAGGAAAAAAGTTGCTGCTTATCGCTATGTTGTTAGAAAATGCACCCCCATTTAA 1338 0.426 MIHLGHSQNPTLMMDSSAPNTPFQDTPETASPKPYKKSFVSTLMEAATLRTPSFKEDNYFVSLLKPSERKSLQELKEKLKNASQSSSNDGENVENNGVVSSGTATMWGIPLLGGDDRADVILLKFLRARDFRVGDAFTMLLKCLNWRKDFGAETIVDEDLGFKELEGVIAYMQGYDKEGHPVCYNAYGVFRDKEMYERIFGDDEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNRASDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKVLSSEEAIHNSFTSKENGKMVLSVDNSSSRRKKVAAYRYVVRKCTPI* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1913 445 SMART sec14_4 164 328 IPR001251 -
Aev02g1913 445 MobiDBLite consensus disorder prediction 1 35 - -
Aev02g1913 445 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 158 331 IPR001251 -
Aev02g1913 445 MobiDBLite consensus disorder prediction 9 28 - -
Aev02g1913 445 PANTHER PATELLIN-1 25 443 IPR044834 GO:0008289
Aev02g1913 445 Gene3D - 62 149 - -
Aev02g1913 445 PANTHER PATELLIN-6 25 443 - -
Aev02g1913 445 PRINTS Cellular retinaldehyde-binding protein signature 283 302 - -
Aev02g1913 445 PRINTS Cellular retinaldehyde-binding protein signature 121 143 - -
Aev02g1913 445 ProSiteProfiles GOLD domain profile. 307 441 IPR009038 -
Aev02g1913 445 SMART CRAL_TRIO_N_2 118 143 IPR011074 -
Aev02g1913 445 Pfam CRAL/TRIO domain 166 325 IPR001251 -
Aev02g1913 445 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 342 440 IPR036598 -
Aev02g1913 445 Gene3D GOLD domain 337 439 - -
Aev02g1913 445 Coils Coil 65 89 - -
Aev02g1913 445 CDD SEC14 162 326 IPR001251 -
Aev02g1913 445 SUPERFAMILY CRAL/TRIO N-terminal domain 64 159 IPR036273 -
Aev02g1913 445 SUPERFAMILY CRAL/TRIO domain 163 328 IPR036865 -
Aev02g1913 445 Pfam CRAL/TRIO, N-terminal domain 72 141 IPR011074 -
Aev02g1913 445 MobiDBLite consensus disorder prediction 75 97 - -
Aev02g1913 445 Gene3D - 156 336 IPR036865 -
Aev02g1913 445 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1913 Aev-Chr2 20970409 20973354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1913 122 297 Acyl Lipid Metabolism Gene Families AT5G47730 29.348 6.32e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1913 - - gmx:100809944 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1913 02 20970409 20973354 Aev02g1913 02 20970409 20973354 ECH
Aev06g3013 06 31707946 31711460 Aev02g1913 02 20970409 20973354 PCT