Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1832 ATGGCCGTCGTTGGTGTACTCGCCTTACAAGGATCCTTCAATGAACACATTGCTGCTCTTAGGAGGTTAGGGGTGAAAGGGGTGGAGATTCGGAAGCCAGAGCAGCTTGATGGAGTGAGTTCACTCATCATCCCTGGTGGAGAGAGCACCACCATGGCTAAGCTTGCTGAATACCATAACCTGTTTCCGTCGTTGCGGGAGTTTGTACAAATGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCTTGGCAAACAAAGCAACAGGACAGAAGAGTGGTGGACAAGAACTGGTTGGTGGACTTGATTGTACTGTGCATAGAAATTTCTTTGGCAGCCAGATTCAAAGCTTTGAAGCAGAGCTTTCAGTGCCAGCGCTTGCTTCCAAGGAAGGTGGTCCTGAAACATTTCGTGCAATTTTTATCCGTGCTCCGGCAATTCTTGAAGCAGGGCCAGAAGTTCAAGTTCTTGCTGATTATCCTGTCCCTTCTAACAGATTGTTGAGTTCTGATTCCTCTGTTGAAGACCAAAAGGAGAATGCTGAAGGAGAAAATAAAGTTATAGTTGCCGTGCGACAAGGCAACATACTGGCGACTGCTTTCCATCCTGAATTGACTGCCGATACTCGATGGCATAGCTATTTCTTGAAGATGACAAATCCAATTGGTGGAGAAGAGGCATCAAGTAGTAGCATTGTTCCAGCAGAGACCAAGAATGACCTACCTATCTATCAATAG 741 0.4642 MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLDGVSSLIIPGGESTTMAKLAEYHNLFPSLREFVQMGKPVWGTCAGLIFLANKATGQKSGGQELVGGLDCTVHRNFFGSQIQSFEAELSVPALASKEGGPETFRAIFIRAPAILEAGPEVQVLADYPVPSNRLLSSDSSVEDQKENAEGENKVIVAVRQGNILATAFHPELTADTRWHSYFLKMTNPIGGEEASSSSIVPAETKNDLPIYQ* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1832 246 ProSiteProfiles PdxT/SNO family profile. 3 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 Hamap Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 MobiDBLite consensus disorder prediction 225 246 - -
Aev02g1832 246 PANTHER - 2 221 - -
Aev02g1832 246 CDD GATase1_PB 4 217 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 SUPERFAMILY Class I glutamine amidotransferase-like 3 219 IPR029062 -
Aev02g1832 246 Pfam SNO glutamine amidotransferase family 6 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 PIRSF Glut_amidoT_SNO 1 223 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 TIGRFAM PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 161 IPR002161 GO:0004359|GO:0042819|GO:0042823
Aev02g1832 246 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 3 229 - -
Aev02g1832 246 ProSitePatterns PdxT/SNO family family signature. 41 51 IPR021196 -
Aev02g1832 246 Gene3D - 1 227 IPR029062 -
Aev02g1832 246 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 2 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1832 Aev-Chr2 20138682 20143410 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1832 K08681 - gmx:100776337 424.861