Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g1239 ATGGAGAAAGCTATCAACAGACAGAAGGTTCTGCTTCACCATCTTAGTCCTTCATCTTCATCGATCTATGGCAACGACTCAACCTCGTACTCATCATCTCTCTCTGCTTCGTCTTGTTTGGCTGGGGATAGTGCTGCATATCAGAGGACCTCTGTATTTGGGGATGATGTTGTGATTGTGGCAGCATATAGGACTGCCCTCTGCAAATCTAAACGTGGTGGTTTCAAAGACACTCATCCTGATGATCTGCTAGCTCCTGTTTTGAAGGCTGTAATAGAGAAGACCAATGTGAACCCAAGTGAAGTAGGTGACATTGTTGTGGGTTCTGTATTGGCACCTGGTGCTCTAAGAGCTACTGAATGTCGAATGGCTGCGTTTTATGCTGGTTTCCCTGAAACTGTCCCTGTTAGGACAGTTAACAGGCAATGTTCATCTGGGCTTCAGGCTGTTGCTGATGTAGCTGCAGCTATTAGGGCTGGTTTCTATGACATTGGTATTGGCGCTGGTTTGGAATCAATGACAACTAATCCAATGGGATGGGAAGGATCAGTCAATCCCAAAGTAAAAATGTTTGAACAAGCCCGAAACTGCCTTCTTCCTATGGGTATTACCTCTGAAAATGTTGCACAGCGCTTTGGGGTGTCAAGAAAGGAACAAGATAAGGCTGCAGTTGAGTCTCACAGGCGGGCTGCTGCAGCTACTGCTGCTGGTAAATTTAAAGACGAGATTATACCGGTTTCCACCAAGATTGTGGATCCAAAAACTGGCGACGAGAAACCTGTCACCATTTCCATTGATGATGGAATTCGACCAAATGCTTCATTGTCTGATCTTGCAAAGCTAAAACCTGTATTCAAGAAAGATGGATCCACCACAGCTGGTAATTCTAGCCAGGTGAGTGATGGTGCTGGGGCTGTTCTGCTAATGAAAAGAAGCATTGCAGTGCAAAAGGGGCTGCCCATCCTTGGTGTTTTCAGGTCATTTGCTGCAGTTGGTGTTGATCCTGCCATCATGGGCATTGGTCCAGCTGCTGCAATTCCAGTTGCTGTGAAGTCTGCAGGTCTACAGCTTGATGATATTGACCTTTTTGAAATAAATGAGGCTTTTGCTTCCCAGTACTTATATTGCCGCAACAAGCTGGGGCTTGATCCAGAAAAGATCAATGTTAATGGCGGTGCAATGGCCATCGGGCATCCTTTGGGAGCAACAGGTGCTCGATGCGTGGCAACGCTGTTGCATGAAATGAAGCGCCGGGGAAAGGACTGCCGATTTGGAGTTGTATCTATGTGCATAGGTACAGGAATGGGGGCAGCTGCTGTTTTTGAGAGAGGTGATGGTGTTGATGAGCTTTGCAATGCCCGTAAAGTGGAAGCCAACAACTTTTTATCCAAGGATGCTCGCTAG 1404 0.4658 MEKAINRQKVLLHHLSPSSSSIYGNDSTSYSSSLSASSCLAGDSAAYQRTSVFGDDVVIVAAYRTALCKSKRGGFKDTHPDDLLAPVLKAVIEKTNVNPSEVGDIVVGSVLAPGALRATECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIRAGFYDIGIGAGLESMTTNPMGWEGSVNPKVKMFEQARNCLLPMGITSENVAQRFGVSRKEQDKAAVESHRRAAAATAAGKFKDEIIPVSTKIVDPKTGDEKPVTISIDDGIRPNASLSDLAKLKPVFKKDGSTTAGNSSQVSDGAGAVLLMKRSIAVQKGLPILGVFRSFAAVGVDPAIMGIGPAAAIPVAVKSAGLQLDDIDLFEINEAFASQYLYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDELCNARKVEANNFLSKDAR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g1239 467 PANTHER 3-KETOACYL-COA THIOLASE, PEROXISOMAL 1 463 - -
Aev02g1239 467 TIGRFAM AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 59 442 IPR002155 GO:0016747
Aev02g1239 467 PANTHER BNAC04G11470D PROTEIN 1 463 - -
Aev02g1239 467 SUPERFAMILY Thiolase-like 322 443 IPR016039 GO:0016746
Aev02g1239 467 SUPERFAMILY Thiolase-like 48 314 IPR016039 GO:0016746
Aev02g1239 467 CDD thiolase 58 443 IPR002155 GO:0016747
Aev02g1239 467 ProSitePatterns Thiolases acyl-enzyme intermediate signature. 139 157 IPR020615 GO:0016747
Aev02g1239 467 ProSitePatterns Thiolases active site. 425 438 IPR020610 GO:0016747
Aev02g1239 467 Pfam Thiolase, C-terminal domain 321 443 IPR020617 GO:0016747
Aev02g1239 467 Pfam Thiolase, N-terminal domain 57 312 IPR020616 GO:0016747
Aev02g1239 467 ProSitePatterns Thiolases signature 2. 388 404 IPR020613 GO:0016747
Aev02g1239 467 Gene3D - 52 467 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g1239 Aev-Chr2 12831210 12836221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g1239 1 467 Acyl Lipid Metabolism Gene Families AT2G33150 86.081 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g1239 K07513 - cit:102607600 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev02g1239 02 12831210 12836221 Aev02g1239 02 12831210 12836221 ECH
Aev06g0304 06 2271461 2275797 Aev02g1239 02 12831210 12836221 PCT