Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0421 ATGGGGTTGTCAAGGCAATTCCAACAAGTGTTCAAGCTCATTGACACAAATGGTGATGGCAAGATTTCATCAACTGAGCTAAGTGAAGTTCTTTCATGCCTTGGATACAACAAGGGCATAGCAGAAAAAGAAGCTGAAGTTATGGTCAAAGTCTTGGATTTCAATGGAGATGGGTTTGTGGATTTTGATGAGTTCATGGTTGTCATGAAAGGGAACAACAAAATAGAAGAACAAGAACAAGAAGAACAAGAACAAGAAATTGGTGAAGACCATGATGATGATGAGTATCTTATGGATGCTTTTCTTCTTTATGATACTGATAAGAATGGATTGATCTCTGCTAAGGAACTTAGGAGGGTTCTGATGAATCTTGGGTGTGATCATTGTAGCATAAGGGAGTGCAAGAAAATGATCAAAGGGGTTGATAAGAATGGTGATGGATTTGTTGATTTTGATGAATTTAGATCTATGATGAAAAAAGGACTCACCAATTAG 495 0.3737 MGLSRQFQQVFKLIDTNGDGKISSTELSEVLSCLGYNKGIAEKEAEVMVKVLDFNGDGFVDFDEFMVVMKGNNKIEEQEQEEQEQEIGEDHDDDEYLMDAFLLYDTDKNGLISAKELRRVLMNLGCDHCSIRECKKMIKGVDKNGDGFVDFDEFRSMMKKGLTN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0421 164 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
Aev02g0421 164 Gene3D - 87 163 - -
Aev02g0421 164 PANTHER CALCIUM BINDING PROTEIN 5 161 - -
Aev02g0421 164 ProSiteProfiles EF-hand calcium-binding domain profile. 129 164 IPR002048 GO:0005509
Aev02g0421 164 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Aev02g0421 164 CDD EFh 6 70 IPR002048 GO:0005509
Aev02g0421 164 ProSitePatterns S-100/ICaBP type calcium binding protein signature. 48 69 IPR001751 -
Aev02g0421 164 CDD EFh 96 159 IPR002048 GO:0005509
Aev02g0421 164 SMART efh_1 133 161 IPR002048 GO:0005509
Aev02g0421 164 SMART efh_1 44 72 IPR002048 GO:0005509
Aev02g0421 164 SMART efh_1 96 124 IPR002048 GO:0005509
Aev02g0421 164 SMART efh_1 6 34 IPR002048 GO:0005509
Aev02g0421 164 Gene3D - 4 86 - -
Aev02g0421 164 PANTHER CALCIUM-BINDING PROTEIN CML25-RELATED 5 161 - -
Aev02g0421 164 SUPERFAMILY EF-hand 5 160 IPR011992 -
Aev02g0421 164 Pfam EF-hand domain pair 6 70 IPR002048 GO:0005509
Aev02g0421 164 Pfam EF-hand domain pair 95 159 IPR002048 GO:0005509
Aev02g0421 164 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Aev02g0421 164 ProSitePatterns EF-hand calcium-binding domain. 142 154 IPR018247 -
Aev02g0421 164 ProSitePatterns EF-hand calcium-binding domain. 15 27 IPR018247 -
Aev02g0421 164 ProSitePatterns EF-hand calcium-binding domain. 105 117 IPR018247 -
Aev02g0421 164 ProSiteProfiles EF-hand calcium-binding domain profile. 92 127 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0421 Aev-Chr2 3145605 3146099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0421 97 162 EF-hand Containing Proteins AT1G24620 34.848 3.99e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0421 - - aip:107628548 238.424