Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0417 ATGGCGGCGATGCTTAAAACCTATAGCGCGTGCTTGAGAGGTTCCGATTTCCCTGTTCTCCGCTCCAACAATGCCACTGACGCCAACAAGAGGAGCTCATACTGGAAGCCCCCACAAGCAGCTATAATACCCAACTTCCACCTCCCGATGCGCAGTTTTGAGGTGAAAAATAGGACGTCGACTGAGGACATAAAGTGCCTGAGATTGATATCTGCAATCAAAACTCCATACCTACCTGATGGCCGCTTTGATCTGGAAGCGTATGATTACTTGGTGAATATGCAGCTTGAGAATGGCGTTGAAGGTCTCATTGTTGGGGGCACCACTGGTGAAGGACAATTGATGAGCTGGGATGAACACATAATGCTTATTGGCCACACAGTCAATTGTTTTGGCGGTAAAATTAAGGTTATCGGTAACACCGGAAGCAACTCCACAAGGGAAGCAATTCATGCCAGTGAGCAAGGTTTTGCTGTCGGAATGCATGCTGCCCTTCATATAAACCCTTACTACGGCAAAACCTCCATCGAAGGTATGGTTTCTCACTTTGATAGTGTGCTTTCCATGGGCCCTACAATCATCTATAATGTACCTTCAAGGACTGGTCAAGACATTCCTCCTCATGTCATTCAAACCTTGACTCAAAGTGCCAACTTGGCTGGTATTAAGGAGTGTGTCGGAAACGACCGGATCAAACAGTATACAGCTGATGGGATTGCTGTGTGGAGTGGTAATGATGATCAATGCCATGATGCTAGATGGGGAGGTTTTGGGGCTACTGGAGTGATATCTGTAACCAGCAACCTGGTTCCTGGTTTAATGCGAGACCTCATGTTCGGTGGCAAGAACCCTGCATTGAACTCTAAGCTCCTACCTCTGATCGACTGGCTTTTCCAGGAGCCGAACCCGATCGGTTTGAACACGGCTCTCGCTCAGCTCGGGGTCGTCAGGCCAGTTTTCAGGCTGCCATATGTACCTCTCCATGTGGAGAAAAGGATAGAGTTTGTCAATTTGGTGAAGCAAATTGGCAGAGAGCATTTTGTTGGAGACAAAGATGTTGAAGTTCTTGATGATGATGACTTTATCTTAATTGGCCGTTATTAG 1104 0.4701 MAAMLKTYSACLRGSDFPVLRSNNATDANKRSSYWKPPQAAIIPNFHLPMRSFEVKNRTSTEDIKCLRLISAIKTPYLPDGRFDLEAYDYLVNMQLENGVEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTGSNSTREAIHASEQGFAVGMHAALHINPYYGKTSIEGMVSHFDSVLSMGPTIIYNVPSRTGQDIPPHVIQTLTQSANLAGIKECVGNDRIKQYTADGIAVWSGNDDQCHDARWGGFGATGVISVTSNLVPGLMRDLMFGGKNPALNSKLLPLIDWLFQEPNPIGLNTALAQLGVVRPVFRLPYVPLHVEKRIEFVNLVKQIGREHFVGDKDVEVLDDDDFILIGRY* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0417 367 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE, CHLOROPLASTIC 24 367 - -
Aev02g0417 367 ProSitePatterns Dihydrodipicolinate synthase signature 1. 102 119 IPR020624 GO:0016829
Aev02g0417 367 PRINTS Dihydrodipicolinate synthase signature 135 153 IPR002220 GO:0016829
Aev02g0417 367 PRINTS Dihydrodipicolinate synthase signature 167 183 IPR002220 GO:0016829
Aev02g0417 367 PRINTS Dihydrodipicolinate synthase signature 190 207 IPR002220 GO:0016829
Aev02g0417 367 PRINTS Dihydrodipicolinate synthase signature 99 120 IPR002220 GO:0016829
Aev02g0417 367 ProSitePatterns Dihydrodipicolinate synthase signature 2. 195 225 IPR020625 GO:0016829
Aev02g0417 367 TIGRFAM dapA: 4-hydroxy-tetrahydrodipicolinate synthase 69 339 IPR005263 GO:0008840|GO:0009089
Aev02g0417 367 CDD DHDPS 68 339 IPR005263 GO:0008840|GO:0009089
Aev02g0417 367 Gene3D Aldolase class I 60 367 IPR013785 -
Aev02g0417 367 SUPERFAMILY Aldolase 69 342 - -
Aev02g0417 367 SMART DHDPS_2 65 343 IPR002220 GO:0016829
Aev02g0417 367 PANTHER DIHYDRODIPICOLINATE SYNTHASE 24 367 IPR002220 GO:0016829
Aev02g0417 367 Pfam Dihydrodipicolinate synthetase family 67 341 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0417 Aev-Chr2 3092515 3094931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0417 K01714 - gmx:100788930 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3152 06 33062989 33064111 Aev02g0417 02 3092515 3094931 PCT