Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0351 ATGGCGACTCCATCACCAAACGATGTCGCTTCCTTCATGCGAATCACCGGCGCACCCCAATTCGTCGCCGTCCAAAAACTCGAGGAATATGGAGGGAACCTCAATGAAGCTATTAATGCTCATTTCCTTGAAGTGGATACTAGTACTATGCAAGTTCAGAGGCAAAACATTGGTGTTGCTGCTGCTGCTCCTCCTCCTCCACAATATAGTTACCCTAATGTAAATGCCAATAATCAGGACAATGCTGGGTCACGTGGGATTATGCCTTTCCTTTCTGCTGCTAGAAAGTTTAGACCTTCACTACTACTTGATCCAAACTATAGGAGAGAACTCCGAGATTTATTTAACGGAGTTGGTGCTAGTGGGCATTCACCACATAATTCTTCTATAGGTGAAAATATGACTGGAAATTCGTATGGGGAGGCACGTGATTATCACAATGACTATAGTTTGGCACAGTCCAGCACCTCACGACATGTTGCTGATATTGATGCTGAGGAGGCGATGATCCAGGCTGCAATTGAGGCCTCAAAGAATGAGACAAGAGAAGGGTCTACATGGAACCAATTTGGTGACCATAATGGTTCATCTGATGATGGGATTCCTCATAGTCATCTTCAACAGGAAGATGATGATTTAGCTCATGCACTTTCATTGTCCTTGAAGACGGCAGAGGAAGAGAATGTGATTCGTGATCATCTAGTTATAGAGAAAAGCAAGGAAGAGAAAACCAACAGCAGCAGAAGCACAATGGAGTTAGGAGCATCTTCTAATCAAAGTGTAGCTCGAGATGTTTCACAATCGGTCATTGGTCATCCATCGAACCATAGTGCTGGTGGTCAACTTCAAGCAAATGAAGATGTGTTTAATTCTGACAAGTGGGCTGGCATTTCTTCTGATGAGCTTAAGGAGGCATTGATGCTTGAAAGCGCAATTTTTGGTGAAATTCCCAATCACAGTTCTCAGAAAGTTTCATCTTTGCCTGATCTGCAACATCGTCCAGAAAAAAATGTGGATCCCAAGACGCAGCATTTGTCCAGTCCAACATCACAATTATTAAGCGACACTCGGCTGCTGAGACAACAACAGGATGCCGCTTATCTAGCATCTCTACAGGCTGATAAAAAGAAGGAATTGAATTCTTTCAAGGAAGCTGAAACCCATTGCTCGAAGGATGAAGAGCCATGGGAAAAGATGCTTGAAAGAACTGTATTGGAGAAAATGCTTGAAGAGAAAAAAGTTAGGCTTTCCAAGGAACCACCATTAGATGATGAAAATGCTATTACTATAGTAGTTCGGATGCCAGATGGCAATCGCAGTGAGCATCGCTTTCTCAAGACTGACCAGCTTCAGCTTCTATTTGATTTCATAGACATCCAAGGAGCAGTGAAGCCTGGAACCTATAGAGTGGTAAAGTCGTATCCGCGACGCGCTTACAGCGTTAACGATGGCTCCTTAACATTGAATGAAGTAGGCCTTAACAGCAAGAATGAGGCTTTGTTTCTGGAGTTGATTTAG 1518 0.4335 MATPSPNDVASFMRITGAPQFVAVQKLEEYGGNLNEAINAHFLEVDTSTMQVQRQNIGVAAAAPPPPQYSYPNVNANNQDNAGSRGIMPFLSAARKFRPSLLLDPNYRRELRDLFNGVGASGHSPHNSSIGENMTGNSYGEARDYHNDYSLAQSSTSRHVADIDAEEAMIQAAIEASKNETREGSTWNQFGDHNGSSDDGIPHSHLQQEDDDLAHALSLSLKTAEEENVIRDHLVIEKSKEEKTNSSRSTMELGASSNQSVARDVSQSVIGHPSNHSAGGQLQANEDVFNSDKWAGISSDELKEALMLESAIFGEIPNHSSQKVSSLPDLQHRPEKNVDPKTQHLSSPTSQLLSDTRLLRQQQDAAYLASLQADKKKELNSFKEAETHCSKDEEPWEKMLERTVLEKMLEEKKVRLSKEPPLDDENAITIVVRMPDGNRSEHRFLKTDQLQLLFDFIDIQGAVKPGTYRVVKSYPRRAYSVNDGSLTLNEVGLNSKNEALFLELI* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0351 505 SMART uim 165 184 IPR003903 -
Aev02g0351 505 SMART uim 208 227 IPR003903 -
Aev02g0351 505 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 208 227 IPR003903 -
Aev02g0351 505 MobiDBLite consensus disorder prediction 319 351 - -
Aev02g0351 505 Pfam UBA-like domain 8 43 - -
Aev02g0351 505 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 1 129 - -
Aev02g0351 505 Pfam UBX domain 424 503 IPR001012 GO:0005515
Aev02g0351 505 CDD UBX 429 503 - -
Aev02g0351 505 SMART ubx_3 420 504 IPR001012 GO:0005515
Aev02g0351 505 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 165 184 IPR003903 -
Aev02g0351 505 PANTHER FAS-ASSOCIATED PROTEIN 125 505 - -
Aev02g0351 505 PANTHER FAS-ASSOCIATED PROTEIN 1 129 - -
Aev02g0351 505 Gene3D - 424 504 - -
Aev02g0351 505 CDD UBA_Ubx1_like 6 42 - -
Aev02g0351 505 Pfam Ubiquitin interaction motif 208 223 IPR003903 -
Aev02g0351 505 Pfam Ubiquitin interaction motif 166 178 IPR003903 -
Aev02g0351 505 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1 125 505 - -
Aev02g0351 505 SUPERFAMILY Ubiquitin-like 414 497 IPR029071 -
Aev02g0351 505 ProSiteProfiles UBX domain profile. 423 501 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0351 Aev-Chr2 2549773 2553396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0351 - K18726 gmx:100795740 494.967