LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g0341	ATGGCTACTTGTTCTTCTTCTTCGTCGTTGTGTGCTTCGTTCTCTGTTATTTCGAAACCTTATTCGCAACCCCAATTCGTTTTCTTCAGCTTCCCGAGTCGTCGAACCGGAAGGGTCGGTTCTGGAGCCGGTTCGGGGCGGTTCAGGTGTTCGGCGGGTCAGACCGGGTTCTTCACGAAATTGGGGAGGTTGATAAAGGAGAAAGCGAAGAGTGACGTGGAGAAGATATTCTCAGGGTTCTCGAAGACGAGGAACAACCTCGCCGTCATCGATGAGCTTCTACTATACTGGAACCTCTCAGATACTGATCGTGTCCTTGATGAACTCGAAGAGGCTCTGTTGGTGTCTGATTTTGGGCCAAAGATCACTATTAAGATAGTGGAGAATTTGCGGGAGGATATATTGTCTGGGAAGCTCAAATCAGGGAATGAGATAAAGGAAGCACTGAAGCAGAATGTCTTGGACTTGTTGACCACCAAGGGGAGTAAAACTGAACTTCAACTTGGATTTAGGAAACCAGCTGTAATAATGATAGTTGGTGTCAATGGCGGTGGGAAGACAACATCTTTAGGAAAGCTGGCCTATAGGTTGAAGAATGAAGGGGCAAAGATACTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTGGAAATATGGGCCGAAAGGACTGGCTGTGAGATTGTTATGGCTGAATCAGAGAAAGCTAAAGCACCATCAGTGCTTTCGCAGGCTGTGAAAAAGGGAAAAGAACAAGGTTTTGATATCGTTTTATGCGATACATCTGGACGATTACACACTAATTATAGCCTAATGGAAGAGTTGATTTCTTGCAAAAAGGCAGTTAATAAAGTGGTTTCTGGTGCACCTAATGAGATCCTGCTGGTTCTTGATGGAACTACAGGTTTGAATATGCTGCCACAAGCAAGAGAGTTCAATGATGTTGTGGGTGTAACTGGTTTAATCTTAACCAAGCTGGATGGTTCTGCTAGAGGTGGCTGTGTGGTTAGTGTGGTTGATGAACTTGGAATACCTGTAAAATTTGTTGGTGTTGGTGAAGGTGTAGAAGACCTTCAACCCTTTGATGCAGAGGCCTTTGTCAATGCCATTTTTATGTAA	1128	0.4468	MATCSSSSSLCASFSVISKPYSQPQFVFFSFPSRRTGRVGSGAGSGRFRCSAGQTGFFTKLGRLIKEKAKSDVEKIFSGFSKTRNNLAVIDELLLYWNLSDTDRVLDELEEALLVSDFGPKITIKIVENLREDILSGKLKSGNEIKEALKQNVLDLLTTKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVMAESEKAKAPSVLSQAVKKGKEQGFDIVLCDTSGRLHTNYSLMEELISCKKAVNKVVSGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFM*	376

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g0341	375	Gene3D	-	165	375	IPR027417	-
	Aev02g0341	375	SUPERFAMILY	Domain of the SRP/SRP receptor G-proteins	73	150	IPR036225	-
	Aev02g0341	375	SMART	SRP54_N_2	76	157	IPR013822	GO:0005525\|GO:0006614
	Aev02g0341	375	SMART	SRP54_3	173	375	IPR000897	GO:0005525\|GO:0006614
	Aev02g0341	375	CDD	FtsY	174	373	-	-
	Aev02g0341	375	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	170	373	IPR027417	-
	Aev02g0341	375	SMART	AAA_5	172	345	IPR003593	-
	Aev02g0341	375	Pfam	SRP54-type protein, GTPase domain	173	374	IPR000897	GO:0005525\|GO:0006614
	Aev02g0341	375	PANTHER	BNAA04G26420D PROTEIN	44	374	-	-
	Aev02g0341	375	PANTHER	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	44	374	-	-
	Aev02g0341	375	TIGRFAM	ftsY: signal recognition particle-docking protein FtsY	102	374	IPR004390	GO:0006614
	Aev02g0341	375	ProSitePatterns	SRP54-type proteins GTP-binding domain signature.	348	361	IPR000897	GO:0005525\|GO:0006614
	Aev02g0341	375	Gene3D	-	63	164	IPR042101	-
	Aev02g0341	375	Pfam	SRP54-type protein, helical bundle domain	102	151	IPR013822	GO:0005525\|GO:0006614

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g0341	Aev-Chr2	2475655	2478931	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g0341	K03110		-	gmx:100791073	626.32

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev02g0341	02	2475655	2478931	Aev02g0341	02	2475655	2478931	ECH