Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev02g0277 ATGCTCTTCAAATCTCATTTCAAAAAACAGGTCTTTTTCCCTCCAACCCTTTCTTATTCATTTATCACTCAATTCTTCAGTAACTATTCTCATCAACCTCATCAATTTAGCACCTTAAGTAGAGTCAGAGCTTCTGTTCCAATCCCTGATGAAACCCTTTTCAGGAACCCTAACACTGTTCATTTGTTCTGTTCCAATGCTCTTAAAGTCTCAGCCAAAAGGGGCTTTCTCCCTGAAGGGAAACAGCTACATGCCCATTTGATAAAGTTTGGATTTTGTCATGTTCTGTCCTTGCAAAATCAGATTTTGAGTGTTTACCTTAAATGCAAAGAATCTGAAGATGCAGTTAAACTGTTTGAGGAATTGCCTGTGAGAAATGTGGTGTCATGGAATATTGTGATTCGTGGCATCGTTGGATGTGGCGATGAAAATGGCTCTAATTCACAACTGGGGTTTTGTTATTTCAAGAGGATGTTGTTGGAAAAGGTTGTTCCGGATTATATAACGTTGAATGGTTTGATTGGTGTGTGTGCTCAGTTTGATGGTATTGACATTGGAATCCAATTTCATTGTTATGCAATGAAATTGGGGTTTGATTTGGATTGTTTTGTTGGTAGTGCTTTAGTTGATTTTTATTCAAAATGTGGTTTGGTTGAGGATGCAAAGAGGGTTTTTCATGTTGTTACATGTAGAGATTTGGTTTTGTGGAATGTGATGATTTCTTGCTATGCCTTGAATTGTTTACCAGAAGTGGCGTTTAGAATGTTCAACTCGATGCGATTGGATGGTGCTAATGGTGACGAGTTTACTTTTAGCAGCCTGCTTAGTATATGCGATAATGTCGAATGCTATGCTTTTGGAAAACAGGTACATGGTCTTATTCTGAGACGGTCATTCGATTCAGATGTTTTAGTGGCTAGTGCATTGATCAACATGTATGTAAAAAATGAAAATGTGATCGATGGACGGAGAGTATTTGATAAGATGGTGACTCGGAATGTTGTGGCGTGGAACACCATGATTGTTGGCTATGGGAGTAACGGCGATTGGAACGATGCTATGAAGCTTCTCAGAGAGATGCTATGTGAAGGGTTTTGCCCTGATGAACTGACTATTTCCAGCATTCTTAGTTCATGTGGCCAGGCTTCGGCCATTACCGAATCGCTGCAAATCCATGCCTTAGCAGTTAAATTATCATTTCAAGGATTTTTATCTGTTACCAATTCCTTGATTAATGCTTACTCCAAGTGTGGTAGCATTACAAATGCATTAAAATGCTTCGAATCAACCGTAAAACCTGATCTTGTTACTTGGACTTCACTGATAAATGCATATGCATTCCATGGACTTGCCAAAGAAGCAGTGGAGATGTTCGAGAAGATGCTATATTGCGGCATAATACCGGACCGAATTTCCTTTCTCAGCGTTATCACTGCTTGTGCTCATCGCGGATTGGTGACTATGGGACTACACTACTTTAAATTGATGACCAATGTGTATCATATTGTTCCTGATTCAGAACATTATACCTGCATCATTGATCTTCTTGGAAGACATGGTCTTATAAATGAGGCTTTTGAATTCTTGATTTCAATGCCAATTCAAGCCGAATCAAACATGTTAGGAGCATTCATTGGATCTTGCAAGCTGCATTCAAATATAGAACTAGCTAAATGGGCTGCAGAAAAACTCTTCACCATAGAGCCAGAGAAGATTGTAAATTATGCTGTAATGTCTAACATTTACGCCTCTCATAGGCATTGGCACGGCGCGGAAAAAGTGCGCGAAATGATGGACGACAAGAGTGCTGCGAAAATCGCAGGTTGTAGCTGGATAGAGATTTCTGATCAAGTTCATTCATTTGTGTTTAGTGATAAGAACCACCCTAAAGCTTTGGAAATTTATGCTGCATTAAGAATGCTGCTTAGGCCAATGAAAGAAGAAATGGCATGA 1953 0.3932 MLFKSHFKKQVFFPPTLSYSFITQFFSNYSHQPHQFSTLSRVRASVPIPDETLFRNPNTVHLFCSNALKVSAKRGFLPEGKQLHAHLIKFGFCHVLSLQNQILSVYLKCKESEDAVKLFEELPVRNVVSWNIVIRGIVGCGDENGSNSQLGFCYFKRMLLEKVVPDYITLNGLIGVCAQFDGIDIGIQFHCYAMKLGFDLDCFVGSALVDFYSKCGLVEDAKRVFHVVTCRDLVLWNVMISCYALNCLPEVAFRMFNSMRLDGANGDEFTFSSLLSICDNVECYAFGKQVHGLILRRSFDSDVLVASALINMYVKNENVIDGRRVFDKMVTRNVVAWNTMIVGYGSNGDWNDAMKLLREMLCEGFCPDELTISSILSSCGQASAITESLQIHALAVKLSFQGFLSVTNSLINAYSKCGSITNALKCFESTVKPDLVTWTSLINAYAFHGLAKEAVEMFEKMLYCGIIPDRISFLSVITACAHRGLVTMGLHYFKLMTNVYHIVPDSEHYTCIIDLLGRHGLINEAFEFLISMPIQAESNMLGAFIGSCKLHSNIELAKWAAEKLFTIEPEKIVNYAVMSNIYASHRHWHGAEKVREMMDDKSAAKIAGCSWIEISDQVHSFVFSDKNHPKALEIYAALRMLLRPMKEEMA* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev02g0277 650 Pfam PPR repeat 100 126 IPR002885 -
Aev02g0277 650 Pfam PPR repeat 408 428 IPR002885 -
Aev02g0277 650 Pfam PPR repeat 508 532 IPR002885 -
Aev02g0277 650 Pfam PPR repeat 207 226 IPR002885 -
Aev02g0277 650 Gene3D Tetratricopeptide repeat domain 404 630 IPR011990 GO:0005515
Aev02g0277 650 PANTHER OS07G0259400 PROTEIN 44 632 - -
Aev02g0277 650 Pfam E+ motif 618 643 IPR046849 -
Aev02g0277 650 Gene3D Tetratricopeptide repeat domain 52 184 IPR011990 GO:0005515
Aev02g0277 650 Gene3D Tetratricopeptide repeat domain 288 397 IPR011990 GO:0005515
Aev02g0277 650 Gene3D Tetratricopeptide repeat domain 187 286 IPR011990 GO:0005515
Aev02g0277 650 PANTHER OS07G0578800 PROTEIN-RELATED 44 632 IPR045215 GO:0003723|GO:0009451
Aev02g0277 650 Pfam PPR repeat family 433 481 IPR002885 -
Aev02g0277 650 Pfam PPR repeat family 332 379 IPR002885 -
Aev02g0277 650 Pfam PPR repeat family 232 276 IPR002885 -
Aev02g0277 650 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 232 266 IPR002885 -
Aev02g0277 650 Pfam E motif 551 613 IPR046848 -
Aev02g0277 650 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 333 367 IPR002885 -
Aev02g0277 650 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 434 468 IPR002885 -
Aev02g0277 650 TIGRFAM PPR: pentatricopeptide repeat domain 307 335 IPR002885 -
Aev02g0277 650 TIGRFAM PPR: pentatricopeptide repeat domain 436 469 IPR002885 -
Aev02g0277 650 TIGRFAM PPR: pentatricopeptide repeat domain 335 369 IPR002885 -
Aev02g0277 650 TIGRFAM PPR: pentatricopeptide repeat domain 234 263 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev02g0277 Aev-Chr2 2009870 2011822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev02g0277 63 647 Glycoside Hydrolase AT3G49170 33.167 3.17e-111 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev02g0277 - - gmx:100778378 961.829