LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev02g0208	ATGCCGACCGGCGAGATCCGCTATGCGTCGCCGCCGAAGCACGCGGCGGCTGTAAACAACTCCGTCGTATATGACGGCGGAGCATACGAGGATGAAGGTTGGGTTTGGACTCAGATCAAGGCGGAGGCTCGCCGCGACGCAGAATCGGAGCCTGCGCTCGCAAGCTACCTCTACTCGACGATCCTCTCCCACTCTTCGCTCGAGCGTTCGCTCTCGTTCCACCTTGGGAACAAGCTTTGTTCCTCCACGCTGCTCTCTACGCTACTCTACGACCTCTTCCTCAATGCCTTCTCCTCCGACGCTACGCTGCGATCTGCAACGGTTGCCGATCTTCGCGCCGCGAGGGAGCGTGATCCGGCGTGTGTGTCGTACTCTCATTGCCTTCTTAATTACAAGGGATTCCTTGCGTGTCAGGCACACCGTGTGGCACACAAGCTGTGGCAACAGTCACGGCGGCCGTTGGCTCTAGCACTTCACTCTCGCATTGCTGATGTCTTCGCAGTGGACATTCACCCGGCAGCAAGGATTGGGAAGGGGGTTCTGTTCGACCATGCAACTGGTGTGGTGGTGGGAGAGACAGCAGTTATTGGGAACAATGTCTCGATTCTGCACCATGTCACACTCGGTGGGACTGGGAAGATTGGCGGGGACCGACATCCCAAAATTGGGGACGGGGTGCTGATTGGTGCTGGCGCTACAATTCTTGGTAATGTGAAGATTGGGGAAGGTGCAAAGATTGGTGCCGGGAGCGTTGTTTTGATTGATGTGCCACCACGCACTACCGCAGTTGGGAACCCAGCAAGGTTGGTGGGTGGGAAGGAGAAACCCTCTAAGCATGAGGATGTCCCTGGGGAATCCATGGACCATACTTCCTTCATCTCTGAATGGTCAGATTATATAATTTGA	906	0.5596	MPTGEIRYASPPKHAAAVNNSVVYDGGAYEDEGWVWTQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNAFSSDATLRSATVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHKLWQQSRRPLALALHSRIADVFAVDIHPAARIGKGVLFDHATGVVVGETAVIGNNVSILHHVTLGGTGKIGGDRHPKIGDGVLIGAGATILGNVKIGEGAKIGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII*	302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev02g0208	301	ProSitePatterns	Hexapeptide-repeat containing-transferases signature.	228	256	IPR018357	GO:0016740
	Aev02g0208	301	TIGRFAM	cysE: serine O-acetyltransferase	109	268	IPR005881	GO:0005737\|GO:0006535\|GO:0009001
	Aev02g0208	301	CDD	LbH_SAT	166	266	IPR045304	-
	Aev02g0208	301	SMART	SATase_N_2_a	35	139	IPR010493	GO:0005737\|GO:0006535\|GO:0009001
	Aev02g0208	301	Pfam	Bacterial transferase hexapeptide (six repeats)	219	252	IPR001451	-
	Aev02g0208	301	PANTHER	SERINE ACETYLTRANSFERASE	25	301	-	-
	Aev02g0208	301	Pfam	Hexapeptide repeat of succinyl-transferase	186	202	IPR001451	-
	Aev02g0208	301	Gene3D	serine acetyltransferase, domain 1	20	168	IPR042122	-
	Aev02g0208	301	Pfam	Serine acetyltransferase, N-terminal	35	139	IPR010493	GO:0005737\|GO:0006535\|GO:0009001
	Aev02g0208	301	MobiDBLite	consensus disorder prediction	272	286	-	-
	Aev02g0208	301	SUPERFAMILY	Trimeric LpxA-like enzymes	34	271	IPR011004	-
	Aev02g0208	301	Gene3D	Hexapeptide repeat proteins	169	290	-	-
	Aev02g0208	301	MobiDBLite	consensus disorder prediction	266	288	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev02g0208	Aev-Chr2	1566257	1567798	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev02g0208	35	289	Miscellaneous Gene Families	AT2G17640	56.078	5.50e-92	274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev02g0208	K00640		-	gmx:547632	522.702